RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 NAGKQ9UJ70 344 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 ENPP5Q9UJA9 477 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 POMPQ9Y244 141 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 SNX24Q9Y343 169 aa2.35□□□□□ -2.03
LINC00557-201ENST00000563184 DHX57Q6P158 1386 aaKnown RBP2.35□□□□□ -2.03
LINC00557-201ENST00000563184 TRBV24-1A0A075B6N3 115 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 ZNF878C9JN71 531 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 C8orf87E5RJ46 101 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 I3L4J1 428 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 SOX14O95416 240 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 APOA1P02647 267 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 SPNP16150 400 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 ZNF3P17036 446 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 KCNJ3P48549 501 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 OR10A3P58181 314 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 STX3Q13277 289 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 MMDQ15546 238 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 TCF24Q7RTU0 167 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 C19orf60Q96EN9 201 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 PGLYRP3Q96LB9 341 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 TAPBPLQ9BX59 468 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 FBXL15Q9H469 300 aa2.34□□□□□ -2.03
LINC00557-201ENST00000563184 METTL8Q9H825 291 aaKnown RBP2.34□□□□□ -2.03
LINC00557-201ENST00000563184 SYNRGQ9UMZ2 1314 aa2.34□□□□□ -2.04
LINC00557-201ENST00000563184 LCTP09848 1927 aa2.34□□□□□ -2.04
LINC00557-201ENST00000563184 ARAP3Q8WWN8 1544 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 A0A1W2PRG6 482 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 LECT2O14960 151 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 ZNF73O43830 326 aaPredicted RBP2.33□□□□□ -2.04
LINC00557-201ENST00000563184 PYCR1P32322 319 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 COILP38432 576 aaPredicted RBP2.33□□□□□ -2.04
LINC00557-201ENST00000563184 TPBGQ13641 420 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 FAM162BQ5T6X4 162 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 TMPPEQ6ZT21 453 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 KRTCAP2Q8N6L1 136 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 FER1L6-AS1Q8NA97 138 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 ACBD4Q8NC06 268 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 OR10D4PQ8NGN7 298 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 FAM45AQ8TCE6 357 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 KCTD4Q8WVF5 259 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 PRSS27Q9BQR3 290 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 LINC00588Q9Y4M8 146 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 KMT2EQ8IZD2 1858 aa2.33□□□□□ -2.04
LINC00557-201ENST00000563184 MYO9BQ13459 2157 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 TRAV8-2A0A0B4J237 113 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 A0A1B0GX12 115 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 POLR3GO15318 223 aaPredicted RBP2.32□□□□□ -2.04
LINC00557-201ENST00000563184 SH2D1AO60880 128 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 LDOC1O95751 146 aaPredicted RBP2.32□□□□□ -2.04
LINC00557-201ENST00000563184 EPPINO95925 133 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 PSMB9P28065 219 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 C1QTNF8P60827 252 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 FBXO48Q5FWF7 155 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 C10orf91Q5T1B1 145 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 COPS6Q7L5N1 327 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 OR11G2Q8NGC1 345 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 CLDN23Q96B33 292 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 OR8B2Q96RD0 313 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 EBPLQ9BY08 206 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 ARL6Q9H0F7 186 aa2.32□□□□□ -2.04
LINC00557-201ENST00000563184 RPUSD1Q9UJJ7 312 aaKnown RBP2.32□□□□□ -2.04
LINC00557-201ENST00000563184 FABP7O15540 132 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 FGF16O43320 207 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 SGCEO43556 437 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 BRI3O95415 125 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 PSKH1P11801 424 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 HADHBP55084 474 aaKnown RBP2.31□□□□□ -2.04
LINC00557-201ENST00000563184 ZBTB6Q15916 424 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 PYCR3Q53H96 274 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 OR10J3Q5JRS4 329 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 OLIG3Q7RTU3 272 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 SCXQ7RTU7 201 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 MRPL52Q86TS9 123 aaKnown RBP2.31□□□□□ -2.04
LINC00557-201ENST00000563184 MSRB3Q8IXL7 192 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 LMX1AQ8TE12 382 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 C20orf166-AS1Q96NR2 134 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 FAAP24Q9BTP7 215 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 ALX4Q9H161 411 aaPredicted RBP2.31□□□□□ -2.04
LINC00557-201ENST00000563184 SLC23A2Q9UGH3 650 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 MMACHCQ9Y4U1 282 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 PHLDA3Q9Y5J5 127 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 SHANK3Q9BYB0 1731 aa2.31□□□□□ -2.04
LINC00557-201ENST00000563184 GOLGA8IPA6NC78 632 aa2.3□□□□□ -2.04
LINC00557-201ENST00000563184 CBX5P45973 191 aa2.3□□□□□ -2.04
LINC00557-201ENST00000563184 HES3Q5TGS1 186 aa2.3□□□□□ -2.04
LINC00557-201ENST00000563184 SSX7Q7RTT5 188 aa2.3□□□□□ -2.04
LINC00557-201ENST00000563184 IFT81Q8WYA0 676 aa2.3□□□□□ -2.04
LINC00557-201ENST00000563184 URGCP-MRPS24S4R325 110 aa2.3□□□□□ -2.04
LINC00557-201ENST00000563184 ABCB11O95342 1321 aa2.3□□□□□ -2.04
LINC00557-201ENST00000563184 MYO15BQ96JP2 1530 aa2.3□□□□□ -2.04
LINC00557-201ENST00000563184 FBN1P35555 2871 aaKnown RBP2.3□□□□□ -2.04
LINC00557-201ENST00000563184 ZNF879B4DU55 563 aa2.29□□□□□ -2.04
LINC00557-201ENST00000563184 CRXO43186 299 aaPredicted RBP2.29□□□□□ -2.04
LINC00557-201ENST00000563184 DEDDO75618 318 aa2.29□□□□□ -2.04
LINC00557-201ENST00000563184 GYPCP04921 128 aa2.29□□□□□ -2.04
LINC00557-201ENST00000563184 GUSBP08236 651 aa2.29□□□□□ -2.04
LINC00557-201ENST00000563184 MP68P56378 58 aa2.29□□□□□ -2.04
LINC00557-201ENST00000563184 NOXRED1Q6NXP6 359 aa2.29□□□□□ -2.04
LINC00557-201ENST00000563184 LRRC6Q86X45 466 aa2.29□□□□□ -2.04
LINC00557-201ENST00000563184 NIT1Q86X76 327 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms