RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 RHOFQ9HBH0 211 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 IDI2-AS1Q9NZ38 188 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 HSPE1-MOB4S4R3N1 261 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 TRBV5-7A0A0A0MS05 114 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 IGHV3-43A0A0B4J1X8 118 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 KBTBD11-OT1A0A1B0GTJ5 212 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 LEUTXA8MZ59 168 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 CSN2P05814 226 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 CSF1P09603 554 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 CGB3P0DN86 165 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 CGB7P0DN87 165 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 IGHV3-43DP0DP04 118 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 SSTR5P35346 364 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 PRRX1P54821 245 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 RBM11P57052 281 aaKnown RBP10.04□□□□□ -0.8
SMAD3-208ENST00000558827 BDH1Q02338 343 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 DIAPH2-AS1Q14236 149 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 YIF1BQ5BJH7 314 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 TPTE2P1Q5T6R2 138 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 FAM27D1Q5T7N8 215 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 GLIPR1L1Q6UWM5 242 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 C5orf24Q7Z6I8 188 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 NANOGP1Q8N7R0 232 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 ZNF565Q8N9K5 539 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 ZNF596Q8TC21 504 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 FBLIM1Q8WUP2 373 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 CAPSLQ8WWF8 208 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 TFAP2CQ92754 450 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 RBMXL1Q96E39 390 aaKnown RBP10.04□□□□□ -0.8
SMAD3-208ENST00000558827 PRSS22Q9GZN4 317 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 SERTAD4Q9NUC0 356 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 CNOT2Q9NZN8 540 aaKnown RBP10.04□□□□□ -0.8
SMAD3-208ENST00000558827 OR6C3Q9NZP0 311 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 CKLFQ9UBR5 152 aa10.04□□□□□ -0.8
SMAD3-208ENST00000558827 MRPS28Q9Y2Q9 187 aaKnown RBP10.04□□□□□ -0.8
SMAD3-208ENST00000558827 BUB1B-PAK6H3BSN5 160 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 PEX14O75381 377 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 IGLV1-47P01700 117 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 WNT4P56705 351 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 HNF4GQ14541 408 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 HLA-DRB5Q30154 266 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 C9orf152Q5JTZ5 239 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 C6orf141Q5SZD1 244 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 LIAT1Q6ZQX7 453 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 RTN4RL2Q86UN3 420 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 DERL3Q96Q80 235 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 TMED9Q9BVK6 235 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 MMP27Q9H306 513 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 VCXQ9H320 206 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 RANBP3Q9H6Z4 567 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-208ENST00000558827 DCLRE1BQ9H816 532 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 PLCXD1Q9NUJ7 323 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 PITPNC1Q9UKF7 332 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 PSG11Q9UQ72 335 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 ERGIC3Q9Y282 383 aa10.03□□□□□ -0.8
SMAD3-208ENST00000558827 A0A1W2PRX2 142 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 FAM90A22PA8MWA6 464 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 IL1AP01583 271 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 CDK1P06493 297 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 CD34P28906 385 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 VDAC2P45880 294 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-208ENST00000558827 C2orf68Q2NKX9 166 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 ABCA11PQ4W5N1 156 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 AWAT2Q6E213 333 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 TMEM104Q8NE00 496 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 Q8NFD4 153 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 OR4K15Q8NH41 348 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 OR9G1Q8NH87 305 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 ARL11Q969Q4 196 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 FAM46BQ96A09 425 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 SLC25A33Q9BSK2 321 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 SELENOIQ9C0D9 397 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 KCNK15Q9H427 330 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 FKBP14Q9NWM8 211 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 PAK1IP1Q9NWT1 392 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-208ENST00000558827 IL36GQ9NZH8 169 aa10.02□□□□□ -0.81
SMAD3-208ENST00000558827 IGHV3-72A0A0B4J1Y9 119 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 TMEM30CPA0ZSE6 113 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 UBE2QL1A1L167 161 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 LY6LH3BQJ8 138 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 J3QR06 171 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 FBXO24O75426 580 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 GPX5O75715 221 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 CRTAPO75718 401 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-208ENST00000558827 LPLP06858 475 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 GTF2F2P13984 249 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 BRS3P32247 399 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 REG1BP48304 166 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 DYNLT3P51808 116 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 GP2P55259 537 aaKnown RBP10.01□□□□□ -0.81
SMAD3-208ENST00000558827 TAS2R43P59537 309 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 MED22Q15528 200 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 ACSM3Q53FZ2 586 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 OR10K2Q6IF99 312 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 PRR18Q8N4B5 295 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 DRAM1Q8N682 238 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 TOMM40LQ969M1 308 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 TMEM203Q969S6 136 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 RPEQ96AT9 228 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms