RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 EXD2Q9NVH0 621 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 B3GNT2Q9NY97 397 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 PTTG3PQ9NZH4 202 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 SAMD4AQ9UPU9 718 aaKnown RBP1.86□□□□□ -2.11
SCFD1-219ENST00000556413 FOXJ3Q9UPW0 622 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 SLC35A3Q9Y2D2 325 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 GMPPBQ9Y5P6 360 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 RYR1P21817 5038 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 DNAH7Q8WXX0 4024 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 TGP01266 2768 aa1.86□□□□□ -2.11
SCFD1-219ENST00000556413 DYNC2H1Q8NCM8 4307 aaKnown RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 IGKV1D-17A0A075B6S4 117 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TRAV36DV7A0A075B6V5 113 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 A0A087WUJ7 227 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 IGHV7-81A0A0B4J1V7 117 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 C5orf63A6NC05 138 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 CEACAM18A8MTB9 384 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 SERPINE3A8MV23 424 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 ZNF705EA8MWA4 302 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 F5H5P2 479 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 H3BTX0 84 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 K7N7A8 449 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 SDHDO14521 159 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 AIM2O14862 343 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 PIN1P1O15428 100 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 ZNF208O43345 1280 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 RNF13O43567 381 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TIMM8AO60220 97 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 EIF1BO60739 113 aaKnown RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 NPIPB7O75200 414 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 HLA-DPB1P04440 258 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 BPGMP07738 259 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 KRT16P08779 473 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TFPTP0C1Z6 253 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 PRTN3P24158 256 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 CD1BP29016 333 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 LCN1P31025 176 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 GLRXP35754 106 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 ARR3P36575 388 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 AQP2P41181 271 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 RPS10P46783 165 aaKnown RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 YAP1P46937 504 aaKnown RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 UGT2B15P54855 530 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 CLDN8P56748 225 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 RGS8P57771 180 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 FGF12P61328 243 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 NCALDP61601 193 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 COPZ1P61923 177 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TNFAIP6P98066 277 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 EMX2Q04743 252 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 PMS2P3Q13401 168 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 CASP8Q14790 479 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 OR1Q1Q15612 314 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 SGCAQ16586 387 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 WHAMMP3Q1A5X7 153 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TBC1D28Q2M2D7 210 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 CCDC153Q494R4 210 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 PABPC1L2AQ5JQF8 200 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 LRRC74BQ6ZQY2 392 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 Q6ZR03 302 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 SLC35D2Q76EJ3 337 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TRMT10CQ7L0Y3 403 aaKnown RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 SLC16A14Q7RTX9 510 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 ABHD12BQ7Z5M8 362 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 NUDCD3Q8IVD9 361 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 MSRB3Q8IXL7 192 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 SLC22A24Q8N4F4 322 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 MINDY2Q8NBR6 621 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 NOXO1Q8NFA2 376 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 OR2Z1Q8NG97 314 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 OR52E2Q8NGJ4 325 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 SYNPRQ8TBG9 265 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 AENQ8WTP8 325 aaKnown RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 C17orf50Q8WW18 174 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TRUB1Q8WWH5 349 aaKnown RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 RORBQ92753 470 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 MYDGFQ969H8 173 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 SEH1LQ96EE3 360 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TMEM101Q96IK0 257 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 ZNF75AQ96N20 296 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 OXGR1Q96P68 337 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TRNT1Q96Q11 434 aaKnown RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 OR52B2Q96RD2 323 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 OR52E6Q96RD3 313 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 ARHGDIGQ99819 225 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 ZNF416Q9BWM5 594 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 COMMD4Q9H0A8 199 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 RERGLQ9H628 205 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 MYOZ1Q9NP98 299 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-219ENST00000556413 SIRT7Q9NRC8 400 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TMEM106BQ9NUM4 274 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 UFSP2Q9NUQ7 469 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TMEM38BQ9NVV0 291 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 C1orf123Q9NWV4 160 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 ADA2Q9NZK5 511 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 OR5V1Q9UGF6 321 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 DCDC2Q9UHG0 476 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 NUP50Q9UKX7 468 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 RASD1Q9Y272 281 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 TRAPPC4Q9Y296 219 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms