RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 TRGC1P0CF51 173 aa14.68□□□□□ -0.06
PPP4R3A-208ENST00000555462 GPX4P36969 197 aaPredicted RBP14.68□□□□□ -0.06
PPP4R3A-208ENST00000555462 ICAM4Q14773 271 aa14.68□□□□□ -0.06
PPP4R3A-208ENST00000555462 RTP5Q14D33 572 aa14.68□□□□□ -0.06
PPP4R3A-208ENST00000555462 OR8G2PQ6IF36 304 aa14.68□□□□□ -0.06
PPP4R3A-208ENST00000555462 DPPA2Q7Z7J5 298 aa14.68□□□□□ -0.06
PPP4R3A-208ENST00000555462 THOC3Q96J01 351 aaKnown RBP14.68□□□□□ -0.06
PPP4R3A-208ENST00000555462 LRFN1Q9P244 771 aa14.68□□□□□ -0.06
PPP4R3A-208ENST00000555462 CEBPZOSA8MTT3 80 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 FUT3P21217 361 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 OTX2P32243 289 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 RAB5CP51148 216 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 SUCLG1P53597 346 aaKnown RBP14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 USF2Q15853 346 aaPredicted RBP14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 PRSS8Q16651 343 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 HIST3H3Q16695 136 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 HIST2H3PS2Q5TEC6 136 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 C20orf204Q6ZNR8 217 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 PLK3Q9H4B4 646 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 IGHV5-10-1A0A0J9YXX1 117 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 RHEBQ15382 184 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 HMGN3Q15651 99 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 FAM189A2Q15884 450 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 CYB5R2Q6BCY4 276 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 SSX7Q7RTT5 188 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 IL22RA1Q8N6P7 574 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 LYPD6BQ8NI32 183 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 RPUSD4Q96CM3 377 aaKnown RBP14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 NUDT16L1Q9BRJ7 211 aaKnown RBP14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 UNKLQ9H9P5 680 aaKnown RBP14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 RNF150Q9ULK6 438 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 GAB2Q9UQC2 676 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 POMT1Q9Y6A1 747 aa14.67□□□□□ -0.06
PPP4R3A-208ENST00000555462 SPENQ96T58 3664 aaKnown RBP14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 A0A0U1RQV5 110 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 TP53I11O14683 189 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 PPP1R2P9O14990 202 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 NGFP01138 241 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 CA5BP1Q8WTZ4 195 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 KIAA1324LA8MWY0 1029 aaPredicted RBP14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 SYNGR1O43759 233 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 LILRA1O75019 489 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 PDCD6O75340 191 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 TFF1P04155 84 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 CFIP05156 583 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 SUMO3P55854 103 aaPredicted RBP14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 CARD18P57730 90 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 ERVS71-1P61550 626 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 ADIRFQ15847 76 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 C3AR1Q16581 482 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 LPAL2Q16609 132 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 DMRTC2Q8IXT2 367 aaPredicted RBP14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 ABHD5Q8WTS1 349 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 KCNS2Q9ULS6 477 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 C5orf49A4QMS7 147 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 TK1P04183 234 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 PSG2P11465 335 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 EGR1P18146 543 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 LSM6P62312 80 aaKnown RBP14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 CPEB3Q8NE35 698 aaKnown RBP14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 TAAR9Q96RI9 348 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 RPRMQ9NS64 109 aa14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 ERRFI1Q9UJM3 462 aaPredicted RBP14.66□□□□□ -0.06
PPP4R3A-208ENST00000555462 HERPUD1Q15011 391 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 SPANXN5Q5MJ07 72 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 Q6ZRM9 215 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 ODF3L1Q8IXM7 274 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 SELENOHQ8IZQ5 122 aaKnown RBP14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 OR4D5Q8NGN0 318 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 MOB3AQ96BX8 217 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 TRDCB7Z8K6 153 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 HSPA12AO43301 675 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 WDR1O75083 606 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 HOXA5P20719 270 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 MSX1P28360 303 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 CNN3Q15417 329 aaKnown RBP14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 STX12Q86Y82 276 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 GATAD1Q8WUU5 269 aa14.65□□□□□ -0.06
PPP4R3A-208ENST00000555462 CD200P41217 278 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 IL13RA2Q14627 380 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 FIP1L1Q6UN15 594 aaKnown RBP14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 ZNF100Q8IYN0 542 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 ZDHHC23Q8IYP9 409 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 ADPRHL1Q8NDY3 354 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 TMEM222Q9H0R3 208 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 MGAQ8IWI9 3026 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 DMXL1Q9Y485 3027 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 NPIPB13A6NJU9 1138 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 NPIPB4C9JG80 1138 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 SYNGR3O43761 229 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 LINC00205P59089 165 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 ZNF266Q14584 549 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 OIT3Q8WWZ8 545 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 FOXB1Q99853 325 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 PLEKHF2Q9H8W4 249 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 UCK1Q9HA47 277 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 PATE3B3GLJ2 98 aa14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 SNRPCP09234 159 aaKnown RBP14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 MMP7P09237 267 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3A-208ENST00000555462 CDX1P47902 265 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms