RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 DCLRE1BQ9H816 532 aa12.38□□□□□ -0.43
BRF1-220ENST00000552127 ZNF286AQ9HBT8 521 aa12.38□□□□□ -0.43
BRF1-220ENST00000552127 KIF25Q9UIL4 384 aa12.38□□□□□ -0.43
BRF1-220ENST00000552127 ING4Q9UNL4 249 aa12.38□□□□□ -0.43
BRF1-220ENST00000552127 LYSTQ99698 3801 aa12.38□□□□□ -0.43
BRF1-220ENST00000552127 TRBV5-7A0A0A0MS05 114 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 PNMA8CA0A1B0GUJ8 204 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 MAGEA13PA6NCF6 341 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 C3orf84H3BNL1 204 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 IGLV1-47P01700 117 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 KCNJ3P48549 501 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 WNT4P56705 351 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 RBM11P57052 281 aaKnown RBP12.37□□□□□ -0.43
BRF1-220ENST00000552127 BDH1Q02338 343 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 PAX5Q02548 391 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 C17orf58Q2M2W7 97 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 NHLRC3Q5JS37 347 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 OSR2Q8N2R0 312 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 KLHDC1Q8N7A1 406 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 BPIFB6Q8NFQ5 453 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 TFAP2CQ92754 450 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 OR14A2Q96R54 314 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 S100A13Q99584 98 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 B9D2Q9BPU9 175 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 NCOR1P1Q9H4R4 102 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 IFT22Q9H7X7 185 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 ZNF702PQ9H963 129 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 FKBP14Q9NWM8 211 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 PAK1IP1Q9NWT1 392 aaPredicted RBP12.37□□□□□ -0.43
BRF1-220ENST00000552127 ST3GAL6Q9Y274 331 aa12.37□□□□□ -0.43
BRF1-220ENST00000552127 TRAV8-7A0A075B6U6 113 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 MEIKINA0A087WXM9 373 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 A0A087X0M5 115 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 KBTBD11-OT1A0A1B0GTJ5 212 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 A0A1B0GX30 115 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 WI2-2373I1.2A0A1W2PRP0 233 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 CSTBP04080 98 aaKnown RBP12.36□□□□□ -0.43
BRF1-220ENST00000552127 SERPINA2P20848 420 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 C21orf33P30042 268 aaPredicted RBP12.36□□□□□ -0.43
BRF1-220ENST00000552127 RSBN1Q5VWQ0 802 aaPredicted RBP12.36□□□□□ -0.43
BRF1-220ENST00000552127 LINC00596Q86U02 117 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 SUMF2Q8NBJ7 301 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 OR13A1Q8NGR1 328 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 PLPPR1Q8TBJ4 325 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 KIRREL1Q96J84 757 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 DPCDQ9BVM2 203 aaPredicted RBP12.36□□□□□ -0.43
BRF1-220ENST00000552127 BARHL1Q9BZE3 327 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 MMP28Q9H239 520 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 CALYQ9NYX4 217 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 DPM3Q9P2X0 92 aa12.36□□□□□ -0.43
BRF1-220ENST00000552127 NKX1-2Q9UD57 310 aaPredicted RBP12.36□□□□□ -0.43
BRF1-220ENST00000552127 FAM90A22PA8MWA6 464 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 LEUTXA8MZ59 168 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 TOR1AO14656 332 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 ZNF780AO75290 641 aaPredicted RBP12.35□□□□□ -0.43
BRF1-220ENST00000552127 OR7C1O76099 320 aaPredicted RBP12.35□□□□□ -0.43
BRF1-220ENST00000552127 CD1AP06126 327 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 CGB3P0DN86 165 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 CGB7P0DN87 165 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 IGLL1P15814 213 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 CELP19835 753 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 NFYBP25208 207 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 ARHGDIBP52566 201 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 MPV17LQ2QL34 196 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 HLA-DRB5Q30154 266 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 NSUN5P1Q3KNT7 163 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 Q8N2B8 174 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 NANOGP1Q8N7R0 232 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 ZNF565Q8N9K5 539 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 CREB3L1Q96BA8 519 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 DERL3Q96Q80 235 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 GAR1Q9NY12 217 aaKnown RBP12.35□□□□□ -0.43
BRF1-220ENST00000552127 ZNF581Q9P0T4 197 aa12.35□□□□□ -0.43
BRF1-220ENST00000552127 A0A1W2PPK0 400 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 GEMIN2O14893 280 aaKnown RBP12.34□□□□□ -0.43
BRF1-220ENST00000552127 IL1AP01583 271 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 VSIG10L2P0DP72 767 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 CEACAM3P40198 252 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 PRRX1P54821 245 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 HABP2Q14520 560 aaPredicted RBP12.34□□□□□ -0.43
BRF1-220ENST00000552127 SLC22A6Q4U2R8 563 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 UTF1Q5T230 341 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 JAGN1Q8N5M9 183 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 THRSPQ92748 146 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 MUL1Q969V5 352 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 PRSS22Q9GZN4 317 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 LINC00574Q9H8X3 128 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 PCDHB16Q9NRJ7 776 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 SERTAD4Q9NUC0 356 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 IDI2-AS1Q9NZ38 188 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 ERGIC3Q9Y282 383 aa12.34□□□□□ -0.43
BRF1-220ENST00000552127 MRPS28Q9Y2Q9 187 aaKnown RBP12.34□□□□□ -0.43
BRF1-220ENST00000552127 A0A1W2PP11 408 aa12.33□□□□□ -0.44
BRF1-220ENST00000552127 BUB1B-PAK6H3BSN5 160 aa12.33□□□□□ -0.44
BRF1-220ENST00000552127 CDK1P06493 297 aa12.33□□□□□ -0.44
BRF1-220ENST00000552127 GTF2F2P13984 249 aa12.33□□□□□ -0.44
BRF1-220ENST00000552127 MAPK3P27361 379 aaPredicted RBP12.33□□□□□ -0.44
BRF1-220ENST00000552127 BRS3P32247 399 aa12.33□□□□□ -0.44
BRF1-220ENST00000552127 SSTR5P35346 364 aa12.33□□□□□ -0.44
BRF1-220ENST00000552127 AQP4P55087 323 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms