RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 SPICQ8N5J4 248 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 OR4S1Q8NGB4 309 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 OR11L1Q8NGX0 322 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 NUDT16L1Q9BRJ7 211 aaKnown RBP12.59□□□□□ -0.39
SREK1-209ENST00000520953 PPA2Q9H2U2 334 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 WIPI2Q9Y4P8 454 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 TMEM82A0PJX8 343 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 MEX3AA1L020 520 aaKnown RBP12.59□□□□□ -0.39
SREK1-209ENST00000520953 GYPAP02724 150 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 AMY2AP04746 511 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 DNASE1P24855 282 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 COL10A1Q03692 680 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 ARFRP1Q13795 201 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 MPV17LQ2QL34 196 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 IDO2Q6ZQW0 420 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 OR2T35Q8NGX2 323 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 IGFBPL1Q8WX77 278 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 ERGIC1Q969X5 290 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 DPCDQ9BVM2 203 aaPredicted RBP12.59□□□□□ -0.39
SREK1-209ENST00000520953 PIPOXQ9P0Z9 390 aa12.59□□□□□ -0.39
SREK1-209ENST00000520953 IGKV1D-8A0A087WSZ0 117 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 RP2O75695 350 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 SCGNO76038 276 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 KNG1P01042 644 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 GSTP1P09211 210 aaKnown RBP12.58□□□□□ -0.4
SREK1-209ENST00000520953 IRF2P14316 349 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 PRDX2P32119 198 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 GABRA2P47869 451 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 GNG2P59768 71 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 ATXN7L3Q14CW9 347 aaPredicted RBP12.58□□□□□ -0.4
SREK1-209ENST00000520953 OR52W1Q6IF63 320 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 C20orf204Q6ZNR8 217 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 ANGPTL6Q8NI99 470 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 PLPPR1Q8TBJ4 325 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 CHIAQ9BZP6 476 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 RAB1BQ9H0U4 201 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 RHOFQ9HBH0 211 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 HSF4Q9ULV5 492 aa12.58□□□□□ -0.4
SREK1-209ENST00000520953 TRAV39A0A0B4J263 110 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A10PA6NDY2 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A18PA6NE21 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A16PA6NEW6 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A20PA6NIJ5 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A8PA6NJQ4 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A7PA6NKC0 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A22PA8MWA6 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A12PA8MX19 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A5PA8MXJ8 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A23PA8MXZ1 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A15PP0C7V4 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A13PP0C7W8 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A14PP0C7W9 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM90A24PP0C7X0 464 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 SPIN3Q5JUX0 258 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 C17orf107Q6ZR85 190 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 ZNRF1Q8ND25 227 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 NEK7Q8TDX7 302 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 SLC6A7Q99884 636 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.57□□□□□ -0.48e-7■■■□□ 17.3
SREK1-209ENST00000520953 OOEPA6NGQ2 149 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 LRRC30A6NM36 301 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 OVOL3O00110 214 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 SH2D1BO14796 132 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 DAOP14920 347 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 ZMYND11Q15326 602 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FAM189A2Q15884 450 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 PAN3Q58A45 887 aaKnown RBP12.57□□□□□ -0.4
SREK1-209ENST00000520953 AVPI1Q5T686 147 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 STUMQ69YW2 141 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 ZNF787Q6DD87 383 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 MUC20Q8N307 709 aaPredicted RBP12.57□□□□□ -0.4
SREK1-209ENST00000520953 CCL13Q99616 98 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 TMEM165Q9HC07 324 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 RASL12Q9NYN1 266 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 SLC23A1Q9UHI7 598 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 MAB21L2Q9Y586 359 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 ARID1AO14497 2285 aa12.57□□□□□ -0.4
SREK1-209ENST00000520953 FCN3O75636 299 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 GOSR1O95249 250 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 UBE2MP61081 183 aaKnown RBP12.56□□□□□ -0.4
SREK1-209ENST00000520953 C2orf68Q2NKX9 166 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 HFEQ30201 348 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 LINC00596Q86U02 117 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 FAM216BQ8N7L0 139 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 TPRX1Q8N7U7 411 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 OR13C8Q8NGS7 320 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 SNAPC3Q92966 411 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 WDR89Q96FK6 387 aaPredicted RBP12.56□□□□□ -0.4
SREK1-209ENST00000520953 CMSS1Q9BQ75 279 aaKnown RBP12.56□□□□□ -0.4
SREK1-209ENST00000520953 SLC25A21Q9BQT8 299 aaPredicted RBP12.56□□□□□ -0.4
SREK1-209ENST00000520953 ST6GALNAC5Q9BVH7 336 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 SHARPINQ9H0F6 387 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 IFT22Q9H7X7 185 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 KIAA2026Q5HYC2 2103 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 PPIAL4EA0A075B759 164 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 SERPINE3A8MV23 424 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 PPIAL4DF5H284 164 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 ANKRD17O75179 2603 aaKnown RBP12.56□□□□□ -0.4
SREK1-209ENST00000520953 OR2A4O95047 310 aa12.56□□□□□ -0.4
SREK1-209ENST00000520953 CSN2P05814 226 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms