RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 IGKV1-6A0A0C4DH72 117 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 TINCRA0A1B0GVN0 87 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 A0A1W2PNU3 283 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 GMNCA6NCL1 334 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 LGALS9O00182 355 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 TCF21O43680 179 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 IGKV1-39P01597 117 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 IGKV1D-39P04432 117 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 SERPINA6P08185 405 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 CD79BP40259 229 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 HSPA13P48723 471 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 AP2S1P53680 142 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 FAM53BQ14153 422 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 LRRC26Q2I0M4 334 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 FAM222AQ5U5X8 452 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 STK40Q8N2I9 435 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 CLDN23Q96B33 292 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 GPR82Q96P67 336 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 MARVELD1Q9BSK0 173 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 MRPS26Q9BYN8 205 aaKnown RBP2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 ULBP1Q9BZM6 244 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 CHST5Q9GZS9 411 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 VCXQ9H320 206 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 FBXL15Q9H469 300 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 LRRC19Q9H756 370 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 SND1-IT1Q9HBX3 110 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 NYAP2Q9P242 653 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 POMPQ9Y244 141 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 TBL2Q9Y4P3 447 aaKnown RBP2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 YTHDF2Q9Y5A9 579 aaKnown RBP2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 RFNGQ9Y644 331 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 TMEM131Q92545 1883 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 MAGI3Q5TCQ9 1506 aa2.48□□□□□ -2.01
TRAPPC13-208ENST00000505553 UHRF1BP1LA0JNW5 1464 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 FANCAO15360 1455 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 C9orf84Q5VXU9 1444 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 TNS2Q63HR2 1409 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 UHRF1BP1Q6BDS2 1440 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 IGLV3-16A0A075B6K0 115 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 METTL15A6NJ78 407 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 A8MU10 97 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 C8orf87E5RJ46 101 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 M0R036 132 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 AZIN1O14977 448 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 CXorf1O96002 111 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 SEC11BP0C7V7 166 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 NEFHP12036 1026 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 AGTR1P30556 359 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 IFNGR2P38484 337 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 CMC4P56277 68 aaPredicted RBP2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 FADDQ13158 208 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 C4orf26Q17RF5 130 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 KLHL12Q53G59 568 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 LPCAT4Q643R3 524 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 CASP12Q6UXS9 341 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 ZFP2Q6ZN57 461 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 SHISA6Q6ZSJ9 500 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 CLEC20AQ6ZU45 233 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 CPNE9Q8IYJ1 553 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 ZIC4Q8N9L1 334 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 ERMNQ8TAM6 284 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 CHMP6Q96FZ7 201 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 PACRGQ96M98 296 aaPredicted RBP2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 MBOAT7Q96N66 472 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 RNF5Q99942 180 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 PRSS27Q9BQR3 290 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 BABAM2Q9NXR7 383 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 HMGXB4Q9UGU5 601 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 RAB26Q9ULW5 256 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 ZNF706Q9Y5V0 76 aaPredicted RBP2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 PREX1Q8TCU6 1659 aa2.47□□□□□ -2.01
TRAPPC13-208ENST00000505553 ARAP3Q8WWN8 1544 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 KDM5BQ9UGL1 1544 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 OR7C2O60412 319 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 EPPINO95925 133 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 ASS1P00966 412 aaKnown RBP2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 IFNA5P01569 189 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 TYMSP04818 313 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 LINC00869P0C866 280 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 SLC6A1P30531 599 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 ZNF83P51522 516 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 NKX2-5P52952 324 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 DYNLL1P63167 89 aaKnown RBP2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 SKP2Q13309 424 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 IMPG1Q17R60 797 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 CST9Q5W186 159 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 TMEM215Q68D42 235 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 FAM71E1Q6IPT2 247 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 LRRN1Q6UXK5 716 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 C10orf67Q8IYJ2 551 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 Q8N9L7 120 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 CCDC112Q8NEF3 446 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 CYGBQ8WWM9 190 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 PTH2Q96A98 100 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 TAMM41Q96BW9 452 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 FXYD5Q96DB9 178 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 PPP1R36Q96LQ0 422 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 MS4A8Q9BY19 250 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 PARD6GQ9BYG4 376 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms