RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 NANOS1Q8WY41 292 aaKnown RBP12.66□□□□□ -0.38
CHTOP-206ENST00000495554 GP6Q9HCN6 339 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 MMP26Q9NRE1 261 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 NSG2Q9Y328 171 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 FRYQ5TBA9 3013 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 SLC22A20A6NK97 555 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 PHF1O43189 567 aaPredicted RBP12.65□□□□□ -0.38
CHTOP-206ENST00000495554 WISP2O76076 250 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 DIRAS3O95661 229 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 MBP02144 154 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 DUSP1P28562 367 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 CCL11P51671 97 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 TMEM33P57088 247 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 PMP22Q01453 160 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 TCF15Q12870 199 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 ATRAIDQ6UW56 229 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 TMEM178AQ8NBL3 297 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 FDCSPQ8NFU4 85 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 SMIM8Q96KF7 97 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 HS3ST6Q96QI5 342 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 AMDHD2Q9Y303 409 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 TMED3Q9Y3Q3 217 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 SHANK1Q9Y566 2161 aa12.65□□□□□ -0.38
CHTOP-206ENST00000495554 ABCD4O14678 606 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 MPPED1O15442 326 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 SMIM6P0DI80 62 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 GLI4P10075 376 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 NDUFB7P17568 137 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 WNT5AP41221 380 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 SRPXP78539 464 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 IL34Q6ZMJ4 242 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 MEX3BQ6ZN04 569 aaKnown RBP12.65□□□□□ -0.39
CHTOP-206ENST00000495554 LINC00596Q86U02 117 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 ZNF573Q86YE8 665 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 BCL2L2Q92843 193 aaPredicted RBP12.65□□□□□ -0.39
CHTOP-206ENST00000495554 LURAP1Q96LR2 239 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 OPN3Q9H1Y3 402 aaPredicted RBP12.65□□□□□ -0.39
CHTOP-206ENST00000495554 FBXL17Q9UF56 701 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 ARHGAP21Q5T5U3 1957 aa12.65□□□□□ -0.39
CHTOP-206ENST00000495554 TNRC6AQ8NDV7 1962 aaKnown RBP12.65□□□□□ -0.39
CHTOP-206ENST00000495554 ZNF292O60281 2723 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 KIR2DS1A0A191URI9 304 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 OR5B21A6NL26 309 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 FBP1P09467 338 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 KIR2DS4P43632 304 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 KIR2DS1Q14954 304 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 TMEM268Q5VZI3 342 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 HAGHLQ6PII5 290 aaPredicted RBP12.64□□□□□ -0.39
CHTOP-206ENST00000495554 SSX9Q7RTT3 188 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 CLRN3Q8NCR9 226 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 IL36RNQ9UBH0 155 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 C3orf85A0A1B0GTC6 90 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 SIGLEC5O15389 551 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 SYNGR1O43759 233 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 ATG12O94817 140 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 GNRHRP30968 328 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 GNG3P63215 75 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 NEK7Q8TDX7 302 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 TP53RKQ96S44 253 aa12.64□□□□□ -0.39
CHTOP-206ENST00000495554 ARID1AO14497 2285 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 MED12LQ86YW9 2145 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 CTXN2P0C2S0 81 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 RCC1P18754 421 aaPredicted RBP12.63□□□□□ -0.39
CHTOP-206ENST00000495554 PJVKQ0ZLH3 352 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 MST1LQ2TV78 715 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 LDLRAD3Q86YD5 345 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 UBAC2Q8NBM4 344 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 ATP23Q9Y6H3 246 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 PTPRBP23467 1997 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 TRDCB7Z8K6 153 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 ST8SIA3O43173 380 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 SCTP09683 121 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 KCNJ3P48549 501 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 SULT1A2P50226 295 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 AKR1C2P52895 323 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 AKR1C1Q04828 323 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 IL13RA2Q14627 380 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 GPR157Q5UAW9 335 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 FBXW12Q6X9E4 464 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 MDP1Q86V88 176 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 NKX6-2Q9C056 277 aaPredicted RBP12.63□□□□□ -0.39
CHTOP-206ENST00000495554 TMEM222Q9H0R3 208 aa12.63□□□□□ -0.39
CHTOP-206ENST00000495554 RAB4AP20338 218 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 RND3P61587 244 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 IL24Q13007 206 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 IGFL2Q6UWQ7 119 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 SLC35G3Q8N808 338 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 OR52M1Q8NGK5 317 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 OR4A4PQ8NGN8 299 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 TSNAXQ99598 290 aaKnown RBP12.62□□□□□ -0.39
CHTOP-206ENST00000495554 HRH4Q9H3N8 390 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 MIOXQ9UGB7 285 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 J3QW42 95 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 HSPB6O14558 160 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 LILRA1O75019 489 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 BLOC1S1P78537 153 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 SVBPQ8N300 66 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 SUMF2Q8NBJ7 301 aa12.62□□□□□ -0.39
CHTOP-206ENST00000495554 GMPPAQ96IJ6 420 aaPredicted RBP12.62□□□□□ -0.39
CHTOP-206ENST00000495554 PKIBQ9C010 78 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms