RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 STEAP4Q687X5 459 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 KDM4DQ6B0I6 523 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 NKAIN4Q8IVV8 208 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 LRRC34Q8IZ02 419 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 SLC34A3Q8N130 599 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 ZNF567Q8N184 647 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 UMODL1-AS1Q8N2C9 162 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 DCAKDQ8WVC6 231 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 PDCD1LG2Q9BQ51 273 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 SULT4A1Q9BR01 284 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 HDHD3Q9BSH5 251 aaPredicted RBP5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 CHAC1Q9BUX1 264 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 TMEM27Q9HBJ8 222 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 IL37Q9NZH6 218 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 IL17CQ9P0M4 197 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 AP3M1Q9Y2T2 418 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 COL4A2P08572 1712 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 CFAP46Q8IYW2 2715 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 FAM92AA1XBS5 289 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 F5H5T6 163 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 KCNK1O00180 336 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 ZNF593O00488 134 aaPredicted RBP5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 KALRNO60229 2985 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 RAD1O60671 282 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 SS18L1O75177 396 aaPredicted RBP5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 SPAG7O75391 227 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 RPA3P35244 121 aaPredicted RBP5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 SYNJ2BPP57105 145 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 EIF4EBP2Q13542 120 aaPredicted RBP5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 RBMY1FQ15415 496 aaKnown RBP5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 CCDC153Q494R4 210 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 CRLF3Q8IUI8 442 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 C4orf33Q8N1A6 199 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 DOK4Q8TEW6 326 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 TEAD3Q99594 435 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 ZNF251Q9BRH9 671 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 C7orf50Q9BRJ6 194 aaKnown RBP5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 SAMD10Q9BYL1 202 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 RPS10P5Q9NQ39 176 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 RBM22Q9NW64 420 aaKnown RBP eCLIP5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 NUFIP1Q9UHK0 495 aaKnown RBP5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 USH1CQ9Y6N9 552 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 MYH10P35580 1976 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 DENND4CQ5VZ89 1909 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 DOPEY2Q9Y3R5 2298 aa5.07□□□□□ -1.6
GAPVD1-217ENST00000479511 MUC22E2RYF6 1773 aaPredicted RBP5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 GTF3C1Q12789 2109 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 FREM2Q5SZK8 3169 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 ATG2BQ96BY7 2078 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 ITPR3Q14573 2671 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 TRAV8-4A0A0B4J246 113 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 TRIM49D1C9J1S8 452 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 SULT1C2O00338 296 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 RAD51BO15315 384 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 UPK1BO75841 260 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 PTHP01270 115 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 P01737 135 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 SLC35G6P0C7Q6 338 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 HMGA1P17096 107 aaKnown RBP5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 TCN2P20062 427 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 TAC1P20366 129 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 PAX6P26367 422 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 CRABP2P29373 138 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 POLR2IP36954 125 aaKnown RBP5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 MNAT1P51948 309 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 OR10A3P58181 314 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 OR12D2P58182 307 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 DSTNP60981 165 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 IL5RAQ01344 420 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 GINS1Q14691 196 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 ORMDL2Q53FV1 153 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 TMEM255AQ5JRV8 349 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 Q6ZS52 159 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 ZNF738Q8NE65 137 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 OR10G4Q8NGN3 311 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 LINC01006Q8NI28 216 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 RNASEH2CQ8TDP1 164 aaKnown RBP5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 TBL1YQ9BQ87 522 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 PYGO2Q9BRQ0 406 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 KIFC1Q9BW19 673 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 SLC38A1Q9H2H9 487 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 FGFR1OP2Q9NVK5 253 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 PPIL1Q9Y3C6 166 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 ASXL3Q9C0F0 2248 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 KIF26AQ9ULI4 1882 aaPredicted RBP5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 ACACAQ13085 2346 aa5.06□□□□□ -1.6
GAPVD1-217ENST00000479511 PLXNB3Q9ULL4 1909 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 OBSL1O75147 1896 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 IGLV3-10A0A075B6K4 115 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 IGKV1-27A0A075B6S5 117 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 J3QT63 122 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 CDIPTO14735 213 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 AQP9O43315 295 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 CCDC22O60826 627 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 EDF1O60869 148 aaKnown RBP5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 BANF1O75531 89 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 ADAP1O75689 374 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 SEMA3DO95025 777 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 HLA-DPB1P04440 258 aa5.05□□□□□ -1.6
GAPVD1-217ENST00000479511 HTR1DP28221 377 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms