RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 OR4P4Q8NGL7 312 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 OR13C9Q8NGT0 318 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 CAPSLQ8WWF8 208 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 THRSPQ92748 146 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 EMG1Q92979 244 aaKnown RBP12.47□□□□□ -0.41
SRRT-209ENST00000474896 AKR1E2Q96JD6 320 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 DERL3Q96Q80 235 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 ZCCHC4Q9H5U6 513 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 LIN7BQ9HAP6 207 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 DPM3Q9P2X0 92 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 IL36RNQ9UBH0 155 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 KIAA2026Q5HYC2 2103 aa12.46□□□□□ -0.41
SRRT-209ENST00000474896 PSPNO60542 156 aa12.46□□□□□ -0.41
SRRT-209ENST00000474896 DUS4LO95620 317 aaKnown RBP12.46□□□□□ -0.41
SRRT-209ENST00000474896 ATF1P18846 271 aa12.46□□□□□ -0.41
SRRT-209ENST00000474896 MAPK3P27361 379 aaPredicted RBP12.46□□□□□ -0.41
SRRT-209ENST00000474896 DUSP1P28562 367 aa12.46□□□□□ -0.41
SRRT-209ENST00000474896 BRS3P32247 399 aa12.46□□□□□ -0.41
SRRT-209ENST00000474896 UNQ9370/PRO34162Q6UXP9 181 aa12.46□□□□□ -0.41
SRRT-209ENST00000474896 BAIAP2L2Q6UXY1 529 aa12.46□□□□□ -0.41
SRRT-209ENST00000474896 TRAPPC6BQ86SZ2 158 aa12.46□□□□□ -0.41
SRRT-209ENST00000474896 OR4X2Q8NGF9 303 aa12.46□□□□□ -0.41
SRRT-209ENST00000474896 ORAI1Q96D31 301 aa12.46□□□□□ -0.41
SRRT-209ENST00000474896 SEBOXQ9HB31 216 aaPredicted RBP12.46□□□□□ -0.41
SRRT-209ENST00000474896 TAS2R4Q9NYW5 299 aa12.46□□□□□ -0.41
SRRT-209ENST00000474896 IGKV1-9A0A0C4DH69 117 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 A0A1W2PPK0 400 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 SH2D7A6NKC9 451 aaPredicted RBP12.45□□□□□ -0.42
SRRT-209ENST00000474896 GABRPO00591 440 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 SULT1B1O43704 296 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 CALCBP10092 127 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 HOXD3P31249 432 aaPredicted RBP12.45□□□□□ -0.42
SRRT-209ENST00000474896 NPBWR2P48146 333 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 FABP5Q01469 135 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 KHDC1LQ5JSQ8 128 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 TMEM91Q6ZNR0 172 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 CEACAM19Q7Z692 300 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 BORCS8Q96FH0 119 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 RBM14Q96PK6 669 aaKnown RBP12.45□□□□□ -0.42
SRRT-209ENST00000474896 SLC25A33Q9BSK2 321 aa12.45□□□□□ -0.42
SRRT-209ENST00000474896 KMT2CQ8NEZ4 4911 aaKnown RBP12.44□□□□□ -0.42
SRRT-209ENST00000474896 MGST3O14880 152 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 OR2F2O95006 317 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 TFAP2AP05549 437 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 OCMP0CE72 109 aaPredicted RBP12.44□□□□□ -0.42
SRRT-209ENST00000474896 CD36P16671 472 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 IGFBP3P17936 291 aaPredicted RBP12.44□□□□□ -0.42
SRRT-209ENST00000474896 FSTP19883 344 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 RAB3AP20336 220 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 ERP29P30040 261 aaKnown RBP12.44□□□□□ -0.42
SRRT-209ENST00000474896 PPP3R1P63098 170 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 CD69Q07108 199 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 FAM27D1Q5T7N8 215 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 PRAMEF5Q5TYX0 476 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 OR52W1Q6IF63 320 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 ZNF529Q6P280 563 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 CD200R1LQ6Q8B3 271 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 RTN4RL2Q86UN3 420 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 FAM58AQ8N1B3 248 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 DNAAF1Q8NEP3 725 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 OR51A2Q8NGJ7 313 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 SPSB1Q96BD6 273 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 RBFOX1Q9NWB1 397 aaKnown RBP12.44□□□□□ -0.42
SRRT-209ENST00000474896 CKLFQ9UBR5 152 aa12.44□□□□□ -0.42
SRRT-209ENST00000474896 UBE2J1Q9Y385 318 aaPredicted RBP12.44□□□□□ -0.42
SRRT-209ENST00000474896 COL7A1Q02388 2944 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 TRAV8-7A0A075B6U6 113 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 TRDV1A0A1B0GX56 115 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 FAM172BPA6NC97 362 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 LEUTXA8MZ59 168 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 GPX5O75715 221 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 AMY1AP04745 511 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 AMY2AP04746 511 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 UCHL1P09936 223 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 BCL3P20749 454 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 GALP22466 123 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 PRKACBP22694 351 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 SNU13P55769 128 aaKnown RBP12.43□□□□□ -0.42
SRRT-209ENST00000474896 P2RX3P56373 397 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 EGFEM1PQ0D2K5 195 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 ZNF146Q15072 292 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 HSD17B12Q53GQ0 312 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 C9orf152Q5JTZ5 239 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 Q8IYB0 196 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 LINC00482Q8N8I6 264 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 ZNF596Q8TC21 504 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 PHYHIPQ92561 330 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 PPIL3Q9H2H8 161 aaKnown RBP12.43□□□□□ -0.42
SRRT-209ENST00000474896 NEK6Q9HC98 313 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 GLS2Q9UI32 602 aa12.43□□□□□ -0.42
SRRT-209ENST00000474896 SIRPB1O00241 398 aa12.42□□□□□ -0.42
SRRT-209ENST00000474896 ARL6IP5O75915 188 aa12.42□□□□□ -0.42
SRRT-209ENST00000474896 CYB5AP00167 134 aa12.42□□□□□ -0.42
SRRT-209ENST00000474896 HCKP08631 526 aa12.42□□□□□ -0.42
SRRT-209ENST00000474896 PRKACAP17612 351 aa12.42□□□□□ -0.42
SRRT-209ENST00000474896 GADD45AP24522 165 aa12.42□□□□□ -0.42
SRRT-209ENST00000474896 CDK2P24941 298 aa12.42□□□□□ -0.42
SRRT-209ENST00000474896 OR3A1P47881 315 aa12.42□□□□□ -0.42
SRRT-209ENST00000474896 ALDH3B2P48448 385 aa12.42□□□□□ -0.42
SRRT-209ENST00000474896 POU3F4P49335 361 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms