RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SPG11Q96JI7 2443 aa4.93□□□□□ -1.62
USP39-213ENST00000467885 A0A096LNT2 108 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 TRAV39A0A0B4J263 110 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 IGHV4-61A0A0C4DH41 118 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 F5H0A9 414 aaPredicted RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 J3QRK9 145 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 NDUFB3O43676 98 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 HEXAP06865 529 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 CD3GP09693 182 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 CSF3P09919 207 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 H2AFB1P0C5Y9 115 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 H2AFB2P0C5Z0 115 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 ZFP36P26651 326 aaKnown RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 KCNJ3P48549 501 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 SEC61A1P61619 476 aaKnown RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 IL13RA1P78552 427 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 MRPS10P82664 201 aaKnown RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 GRK1Q15835 563 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 KCNJ8Q15842 424 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 CLEC12BQ2HXU8 276 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 PAN3Q58A45 887 aaKnown RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 WDR25Q64LD2 544 aaPredicted RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 FIP1L1Q6UN15 594 aaKnown RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 BAIAP2L2Q6UXY1 529 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 Q6ZS49 121 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 SLC36A1Q7Z2H8 476 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 HOGA1Q86XE5 327 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 OR8H2Q8N162 312 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 Q8N402 240 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 LY6G5BQ8NDX9 201 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 OR4K15Q8NH41 348 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 CLDND2Q8NHS1 167 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 MRPL30Q8TCC3 161 aaKnown RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 NUDCD2Q8WVJ2 157 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 FAM168AQ92567 244 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 NEIL1Q96FI4 390 aaPredicted RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 TIMD4Q96H15 378 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 C1orf159Q96HA4 380 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 CMSS1Q9BQ75 279 aaKnown RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 BPESC1Q9GZL8 116 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 PPA2Q9H2U2 334 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 RIMS4Q9H426 269 aaPredicted RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 LINC00574Q9H8X3 128 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 SCPEP1Q9HB40 452 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 MBNL3Q9NUK0 354 aaKnown RBP4.92□□□□□ -1.62
USP39-213ENST00000467885 ETAA1Q9NY74 926 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 KIF25Q9UIL4 384 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 DYSFO75923 2080 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 DOPEY2Q9Y3R5 2298 aa4.92□□□□□ -1.62
USP39-213ENST00000467885 ASH1LQ9NR48 2969 aaKnown RBP4.91□□□□□ -1.62
USP39-213ENST00000467885 DSCAMO60469 2012 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 IGKV1-6A0A0C4DH72 117 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 KIR2DS1A0A191URI9 304 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 ANKRD20A5PA0PJZ0 165 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 MEIS3P1A6NDR6 274 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 KIAA1324LA8MWY0 1029 aaPredicted RBP4.91□□□□□ -1.62
USP39-213ENST00000467885 NPIPB11E5RHQ5 1161 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 C15orf65H3BRN8 121 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 HSPB6O14558 160 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 IGHV2-5P01817 119 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 FCER2P06734 321 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 LPLP06858 475 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 FCGR3AP08637 254 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 SCTP09683 121 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 ZNF735P0CB33 412 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 GSTT2P0CG29 244 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 GSTT2BP0CG30 244 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 IL7P13232 177 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 DTYMKP23919 212 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 IL2RGP31785 369 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 DLX6P56179 175 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 P2RX3P56373 397 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 ERVFRD-1P60508 538 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 MEF2CQ06413 473 aaPredicted RBP4.91□□□□□ -1.62
USP39-213ENST00000467885 ARFRP1Q13795 201 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 CARTPTQ16568 116 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 C17orf58Q2M2W7 97 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 C11orf91Q3C1V1 193 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 KRBOX4Q5JUW0 171 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 OR52W1Q6IF63 320 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 FAM53AQ6NSI3 398 aaPredicted RBP4.91□□□□□ -1.62
USP39-213ENST00000467885 DHRS11Q6UWP2 260 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 C8orf86Q6ZUL3 223 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 BTN2A1Q7KYR7 527 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 GDPD3Q7L5L3 318 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 TCF23Q7RTU1 214 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 MUC20Q8N307 709 aaPredicted RBP4.91□□□□□ -1.62
USP39-213ENST00000467885 TPRX1Q8N7U7 411 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 ZNF565Q8N9K5 539 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 TMEM229BQ8NBD8 167 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 OR13A1Q8NGR1 328 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 C8orf46Q8TAG6 207 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 PPP1R35Q8TAP8 253 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 CCDC107Q8WV48 283 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 SMIM4Q8WVI0 70 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 SNAPC3Q92966 411 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 TRIM63Q969Q1 353 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 DACT3Q96B18 629 aaPredicted RBP4.91□□□□□ -1.62
USP39-213ENST00000467885 FOXC2Q99958 501 aa4.91□□□□□ -1.62
USP39-213ENST00000467885 ING3Q9NXR8 418 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms