RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 FADS2O95864 444 aaKnown RBP16.69■□□□□ 0.26
COL9A3-207ENST00000467819 RAB3AP20336 220 aa16.69■□□□□ 0.26
COL9A3-207ENST00000467819 SOX2P48431 317 aa16.69■□□□□ 0.26
COL9A3-207ENST00000467819 MADCAM1Q13477 382 aa16.69■□□□□ 0.26
COL9A3-207ENST00000467819 HNF4GQ14541 408 aa16.69■□□□□ 0.26
COL9A3-207ENST00000467819 IL13RA2Q14627 380 aa16.69■□□□□ 0.26
COL9A3-207ENST00000467819 RSU1Q15404 277 aa16.69■□□□□ 0.26
COL9A3-207ENST00000467819 RSBN1Q5VWQ0 802 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-207ENST00000467819 ETV3LQ6ZN32 361 aa16.69■□□□□ 0.26
COL9A3-207ENST00000467819 CPNE2Q96FN4 548 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-207ENST00000467819 NBEAL2Q6ZNJ1 2754 aa16.68■□□□□ 0.26
COL9A3-207ENST00000467819 TRAV39A0A0B4J263 110 aa16.68■□□□□ 0.26
COL9A3-207ENST00000467819 H3BNX3 289 aa16.68■□□□□ 0.26
COL9A3-207ENST00000467819 RPSAP08865 295 aaKnown RBP16.68■□□□□ 0.26
COL9A3-207ENST00000467819 SSTR5P35346 364 aa16.68■□□□□ 0.26
COL9A3-207ENST00000467819 GBX2P52951 348 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-207ENST00000467819 MRPL41Q8IXM3 137 aaKnown RBP16.68■□□□□ 0.26
COL9A3-207ENST00000467819 C5orf56Q8N8D9 126 aa16.68■□□□□ 0.26
COL9A3-207ENST00000467819 OR51D1Q8NGF3 324 aa16.68■□□□□ 0.26
COL9A3-207ENST00000467819 NCOR1P1Q9H4R4 102 aa16.68■□□□□ 0.26
COL9A3-207ENST00000467819 TAS2R4Q9NYW5 299 aa16.68■□□□□ 0.26
COL9A3-207ENST00000467819 ZNF581Q9P0T4 197 aa16.68■□□□□ 0.26
COL9A3-207ENST00000467819 LINC00527Q9UJ94 153 aa16.68■□□□□ 0.26
COL9A3-207ENST00000467819 A0A1W2PPE3 182 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 SERPINE3A8MV23 424 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 NPIPB11E5RHQ5 1161 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 HTR3BO95264 441 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 IGKV1D-33P01593 117 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 IGKV1-33P01594 117 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 RAB7AP51149 207 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 GTF2A1P52655 376 aaPredicted RBP16.67■□□□□ 0.26
COL9A3-207ENST00000467819 RPL23AP62750 156 aaKnown RBP16.67■□□□□ 0.26
COL9A3-207ENST00000467819 MRPL28Q13084 256 aaKnown RBP16.67■□□□□ 0.26
COL9A3-207ENST00000467819 VAX1Q5SQQ9 334 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 C11orf87Q6NUJ2 197 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 C18orf65Q6ZTR6 163 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 OR52I1Q8NGK6 324 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 OR10X1Q8NGY0 326 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 HAVCR2Q8TDQ0 301 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 CHPT1Q8WUD6 406 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 DPF1Q92782 380 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 LINC00574Q9H8X3 128 aa16.67■□□□□ 0.26
COL9A3-207ENST00000467819 NUDT19A8MXV4 375 aa16.66■□□□□ 0.26
COL9A3-207ENST00000467819 RAB40BQ12829 278 aa16.66■□□□□ 0.26
COL9A3-207ENST00000467819 ZNF529Q6P280 563 aa16.66■□□□□ 0.26
COL9A3-207ENST00000467819 C8orf86Q6ZUL3 223 aa16.66■□□□□ 0.26
COL9A3-207ENST00000467819 OR2W3Q7Z3T1 314 aa16.66■□□□□ 0.26
COL9A3-207ENST00000467819 OR8H3Q8N146 312 aa16.66■□□□□ 0.26
COL9A3-207ENST00000467819 SUMF2Q8NBJ7 301 aa16.66■□□□□ 0.26
COL9A3-207ENST00000467819 RHOXF1Q8NHV9 184 aa16.66■□□□□ 0.26
COL9A3-207ENST00000467819 RGP1Q92546 391 aaPredicted RBP16.66■□□□□ 0.26
COL9A3-207ENST00000467819 Q96MT0 163 aa16.66■□□□□ 0.26
COL9A3-207ENST00000467819 DPCDQ9BVM2 203 aaPredicted RBP16.66■□□□□ 0.26
COL9A3-207ENST00000467819 JAM3Q9BX67 310 aa16.66■□□□□ 0.26
COL9A3-207ENST00000467819 FGF16O43320 207 aa16.65■□□□□ 0.26
COL9A3-207ENST00000467819 MPZL2O60487 215 aa16.65■□□□□ 0.26
COL9A3-207ENST00000467819 CDRT1O95170 752 aa16.65■□□□□ 0.26
COL9A3-207ENST00000467819 KCNJ3P48549 501 aa16.65■□□□□ 0.26
COL9A3-207ENST00000467819 THBS3P49746 956 aa16.65■□□□□ 0.26
COL9A3-207ENST00000467819 EGFEM1PQ0D2K5 195 aa16.65■□□□□ 0.26
COL9A3-207ENST00000467819 ZFP1Q6P2D0 407 aa16.65■□□□□ 0.26
COL9A3-207ENST00000467819 SLC35E3Q7Z769 313 aa16.65■□□□□ 0.26
COL9A3-207ENST00000467819 GPR61Q9BZJ8 451 aa16.65■□□□□ 0.26
COL9A3-207ENST00000467819 FAM118AQ9NWS6 357 aa16.65■□□□□ 0.26
COL9A3-207ENST00000467819 ST3GAL6Q9Y274 331 aa16.65■□□□□ 0.26
COL9A3-207ENST00000467819 HSD17B6O14756 317 aa16.64■□□□□ 0.25
COL9A3-207ENST00000467819 OR7C1O76099 320 aaPredicted RBP16.64■□□□□ 0.25
COL9A3-207ENST00000467819 REG1BP48304 166 aa16.64■□□□□ 0.25
COL9A3-207ENST00000467819 PAX5Q02548 391 aa16.64■□□□□ 0.25
COL9A3-207ENST00000467819 MOB3BQ86TA1 216 aa16.64■□□□□ 0.25
COL9A3-207ENST00000467819 KLHL30-AS1Q8NEE0 82 aa16.64■□□□□ 0.25
COL9A3-207ENST00000467819 OR10A7Q8NGE5 316 aa16.64■□□□□ 0.25
COL9A3-207ENST00000467819 UBALD1Q8TB05 177 aa16.64■□□□□ 0.25
COL9A3-207ENST00000467819 ING4Q9UNL4 249 aa16.64■□□□□ 0.25
COL9A3-207ENST00000467819 KMT2CQ8NEZ4 4911 aaKnown RBP16.63■□□□□ 0.25
COL9A3-207ENST00000467819 IGHV3-72A0A0B4J1Y9 119 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 CD2P06729 351 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 LIMS3P0CW19 117 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 LIMS4P0CW20 117 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 RBM11P57052 281 aaKnown RBP16.63■□□□□ 0.25
COL9A3-207ENST00000467819 SLC35B1P78383 322 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 XAF1Q6GPH4 301 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 ASCL4Q6XD76 172 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 SLC16A12Q6ZSM3 486 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 Q8NFD4 153 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 GPR148Q8TDV2 347 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 C9orf16Q9BUW7 83 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 METTL9Q9H1A3 318 aa16.63■□□□□ 0.25
COL9A3-207ENST00000467819 RPL36Q9Y3U8 105 aaKnown RBP16.63■□□□□ 0.25
COL9A3-207ENST00000467819 LOC100130705A0A1B0GUX0 176 aa16.62■□□□□ 0.25
COL9A3-207ENST00000467819 CCRL2O00421 344 aa16.62■□□□□ 0.25
COL9A3-207ENST00000467819 IGHG2P01859 326 aa16.62■□□□□ 0.25
COL9A3-207ENST00000467819 CSTBP04080 98 aaKnown RBP16.62■□□□□ 0.25
COL9A3-207ENST00000467819 SERPINA2P20848 420 aa16.62■□□□□ 0.25
COL9A3-207ENST00000467819 ZNF816Q0VGE8 651 aaPredicted RBP16.62■□□□□ 0.25
COL9A3-207ENST00000467819 KLHL22Q53GT1 634 aa16.62■□□□□ 0.25
COL9A3-207ENST00000467819 DDI2Q5TDH0 399 aa16.62■□□□□ 0.25
COL9A3-207ENST00000467819 FOXRED2Q8IWF2 684 aa16.62■□□□□ 0.25
COL9A3-207ENST00000467819 OR52N1Q8NH53 320 aa16.62■□□□□ 0.25
COL9A3-207ENST00000467819 APH1BQ8WW43 257 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms