RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 KRBOX4Q5JUW0 171 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 GPR107Q5VW38 600 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 RSBN1Q5VWQ0 802 aaPredicted RBP15.65■□□□□ 0.1
USP11-205ENST00000467378 VMO1Q7Z5L0 202 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 CMTM4Q8IZR5 234 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 FAM89BQ8N5H3 189 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 CORO2AQ92828 525 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 CYYR1Q96J86 154 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 NICN1Q9BSH3 213 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 BARHL1Q9BZE3 327 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 NCOR1P1Q9H4R4 102 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 PRKDCP78527 4128 aaKnown RBP15.64■□□□□ 0.09
USP11-205ENST00000467378 A0A1W2PPH5 198 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 MEX3AA1L020 520 aaKnown RBP15.64■□□□□ 0.09
USP11-205ENST00000467378 GABARAPO95166 117 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 GLAP06280 429 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 FUT3P21217 361 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 VBP1P61758 197 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 NCS1P62166 190 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 CTF1Q16619 201 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 RAB12Q6IQ22 244 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 URM1Q9BTM9 101 aaKnown RBP15.64■□□□□ 0.09
USP11-205ENST00000467378 UNKLQ9H9P5 680 aaKnown RBP15.64■□□□□ 0.09
USP11-205ENST00000467378 ING3Q9NXR8 418 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 DAPK2Q9UIK4 370 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 SCOCQ9UIL1 159 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 RAB22AQ9UL26 194 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 PEX16Q9Y5Y5 336 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 LINC00312Q9Y6C7 94 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 NOTCH1P46531 2555 aa15.64■□□□□ 0.09
USP11-205ENST00000467378 ODAMA1E959 279 aa15.63■□□□□ 0.09
USP11-205ENST00000467378 FOXI3A8MTJ6 420 aaPredicted RBP15.63■□□□□ 0.09
USP11-205ENST00000467378 C17orf98A8MV24 154 aa15.63■□□□□ 0.09
USP11-205ENST00000467378 MCRIP1C9JLW8 97 aa15.63■□□□□ 0.09
USP11-205ENST00000467378 H3BUI4 141 aa15.63■□□□□ 0.09
USP11-205ENST00000467378 PDCD6O75340 191 aa15.63■□□□□ 0.09
USP11-205ENST00000467378 IGHV4-38-2P0DP08 117 aa15.63■□□□□ 0.09
USP11-205ENST00000467378 CHATP28329 748 aa15.63■□□□□ 0.09
USP11-205ENST00000467378 EFNB2P52799 333 aa15.63■□□□□ 0.09
USP11-205ENST00000467378 ERVFRD-1P60508 538 aa15.63■□□□□ 0.09
USP11-205ENST00000467378 RBM39Q14498 530 aaKnown RBP15.63■□□□□ 0.09
USP11-205ENST00000467378 SLC35E4Q6ICL7 350 aa15.63■□□□□ 0.09
USP11-205ENST00000467378 TNFRSF14Q92956 283 aa15.63■□□□□ 0.09
USP11-205ENST00000467378 UBE2J1Q9Y385 318 aaPredicted RBP15.63■□□□□ 0.09
USP11-205ENST00000467378 CENPVL3A0A0U1RRI6 287 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 SOCS1O15524 211 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 IL1AP01583 271 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 ZNF728P0DKX0 622 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 RAB6AP20340 208 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 PRTN3P24158 256 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 DLX1P56177 255 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 TMEM50BP56557 158 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 BLMHQ13867 455 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 PTX4Q96A99 478 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 ZNF714Q96N38 554 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 METTL8Q9H825 291 aaKnown RBP15.62■□□□□ 0.09
USP11-205ENST00000467378 SIRT7Q9NRC8 400 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 KIF25Q9UIL4 384 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 NUP50Q9UKX7 468 aa15.62■□□□□ 0.09
USP11-205ENST00000467378 IGHV3OR16-10A0A075B7F0 116 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 TRGV10A0A0A0MS01 117 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 TRAV40A0A0B4J280 105 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 CGB3P0DN86 165 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 CGB7P0DN87 165 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 BLVRBP30043 206 aaPredicted RBP15.61■□□□□ 0.09
USP11-205ENST00000467378 SERPINB10P48595 397 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 VEGFCP49767 419 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 ZNF497Q6ZNH5 498 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 GAPTQ8N292 157 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 C22orf15Q8WYQ4 148 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 LHX4Q969G2 390 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 NEDD4LQ96PU5 975 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 SULT4A1Q9BR01 284 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 TAS2R3Q9NYW6 316 aa15.61■□□□□ 0.09
USP11-205ENST00000467378 MEIKINA0A087WXM9 373 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 UBE2QL1A1L167 161 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 RNASEK-C17orf49H0YIS7 233 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 TMEM127O75204 238 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 PAHP00439 452 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 RBP4P02753 201 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 MT-ND4P03905 459 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 SNRPBP14678 240 aaKnown RBP15.6■□□□□ 0.09
USP11-205ENST00000467378 PRB3Q04118 309 aaPredicted RBP15.6■□□□□ 0.09
USP11-205ENST00000467378 NKAPLQ5M9Q1 402 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 IDNKQ5T6J7 187 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 HCP5Q6MZN7 132 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 C6orf201Q7Z4U5 140 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 TRAPPC6BQ86SZ2 158 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 RTN4RL2Q86UN3 420 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 CLVS1Q8IUQ0 354 aaPredicted RBP15.6■□□□□ 0.09
USP11-205ENST00000467378 CROCCP3Q8IVE0 287 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 OR13A1Q8NGR1 328 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 NEK7Q8TDX7 302 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 FAAP24Q9BTP7 215 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 ETAA1Q9NY74 926 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 OR6C3Q9NZP0 311 aa15.6■□□□□ 0.09
USP11-205ENST00000467378 hCG_1809904A0A1W2PP81 198 aa15.59■□□□□ 0.09
USP11-205ENST00000467378 A0A1W2PPE2 198 aa15.59■□□□□ 0.09
USP11-205ENST00000467378 A0A1W2PR64 198 aa15.59■□□□□ 0.09
USP11-205ENST00000467378 A0A1W2PRV1 198 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms