RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 NKX1-2Q9UD57 310 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-204ENST00000462258 ING4Q9UNL4 249 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 FOXJ3Q9UPW0 622 aa8.18□□□□□ -1.1
SF3A3-204ENST00000462258 A0A1W2PPK0 400 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 FAM90A22PA8MWA6 464 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 LEUTXA8MZ59 168 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 WIPF1O43516 503 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 GPX5O75715 221 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 VSIG10L2P0DP72 767 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 GTF2F2P13984 249 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 MAPK3P27361 379 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-204ENST00000462258 CEACAM3P40198 252 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 AQP4P55087 323 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 MPV17LQ2QL34 196 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 SLC22A6Q4U2R8 563 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 ARSJQ5FYB0 599 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-204ENST00000462258 UTF1Q5T230 341 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 TPTE2P1Q5T6R2 138 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 AWAT2Q6E213 333 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 Q8N2B8 174 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 NANOGP1Q8N7R0 232 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 NKAIN3Q8N8D7 197 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 ZNF565Q8N9K5 539 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 OR9G1Q8NH87 305 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 NEK7Q8TDX7 302 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 THRSPQ92748 146 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 MUL1Q969V5 352 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 CREB3L1Q96BA8 519 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 MND1Q9BWT6 205 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 MMP28Q9H239 520 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 NCOR1P1Q9H4R4 102 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 IDI2-AS1Q9NZ38 188 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 ERGIC3Q9Y282 383 aa8.17□□□□□ -1.1
SF3A3-204ENST00000462258 MRPS28Q9Y2Q9 187 aaKnown RBP8.17□□□□□ -1.1
SF3A3-204ENST00000462258 AMMECR1Q9Y4X0 333 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-204ENST00000462258 TMEM30CPA0ZSE6 113 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 BUB1B-PAK6H3BSN5 160 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 MAS1P04201 325 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 CD1AP06126 327 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 CDK1P06493 297 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 CSF1P09603 554 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 CGB3P0DN86 165 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 CGB7P0DN87 165 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 CD24P25063 80 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 BRS3P32247 399 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 NOTCH1P46531 2555 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 PRRX1P54821 245 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 GPR176Q14439 515 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 LTC4SQ16873 150 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 TMEM95Q3KNT9 176 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 ATAD3CQ5T2N8 411 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 HIST2H2BDQ6DRA6 164 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 CCDC144NLQ6NUI1 221 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 GLIPR1L1Q6UWM5 242 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 C16orf82Q7Z2V1 217 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 CAPSLQ8WWF8 208 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 CFHR4Q92496 578 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 LEAP2Q969E1 77 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 TOMM40LQ969M1 308 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 AKR1E2Q96JD6 320 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 SLC25A33Q9BSK2 321 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 PRSS22Q9GZN4 317 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 PCDHB16Q9NRJ7 776 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 SERTAD4Q9NUC0 356 aa8.16□□□□□ -1.1
SF3A3-204ENST00000462258 PRKDCP78527 4128 aaKnown RBP8.15□□□□□ -1.1
SF3A3-204ENST00000462258 TRAV39A0A0B4J263 110 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 OOSP1A8MZH6 123 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 NPIPB11E5RHQ5 1161 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 H3BUI4 141 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 PIN1P1O15428 100 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 KCNAB3O43448 404 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 PEX14O75381 377 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 FBXO24O75426 580 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 IGHV3-7P01780 117 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 MNDAP41218 407 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 VDAC2P45880 294 aaPredicted RBP8.15□□□□□ -1.1
SF3A3-204ENST00000462258 GNG10P50151 68 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 BLCAPP62952 87 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 GABPB1Q06547 395 aaPredicted RBP8.15□□□□□ -1.1
SF3A3-204ENST00000462258 FBLN7Q53RD9 439 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 C6orf141Q5SZD1 244 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 RNLSQ5VYX0 342 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 FAM110DQ8TAY7 271 aaPredicted RBP8.15□□□□□ -1.1
SF3A3-204ENST00000462258 NRG4Q8WWG1 115 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 MYDGFQ969H8 173 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 RPEQ96AT9 228 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 OR5M11Q96RB7 305 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 LINC00574Q9H8X3 128 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 LIN7BQ9HAP6 207 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 SPACA1Q9HBV2 294 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 SCN3BQ9NY72 215 aa8.15□□□□□ -1.1
SF3A3-204ENST00000462258 RCC2Q9P258 522 aaKnown RBP8.15□□□□□ -1.1
SF3A3-204ENST00000462258 PTGES3LE9PB15 166 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 LY6LH3BQJ8 138 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 J3QR06 171 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 AIPO00170 330 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 OR2F2O95006 317 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 MGMTP16455 207 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 SLC35A2P78381 396 aa8.14□□□□□ -1.11
SF3A3-204ENST00000462258 DEFA6Q01524 100 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms