RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	TCF23	Q7RTU1	214 aa		10.35	□□□□□ -0.75
FDPS-204	ENST00000461507	COQ2	Q96H96	371 aa		10.35	□□□□□ -0.75
FDPS-204	ENST00000461507	OR6C3	Q9NZP0	311 aa		10.35	□□□□□ -0.75
FDPS-204	ENST00000461507	UBE2J1	Q9Y385	318 aa	Predicted RBP	10.35	□□□□□ -0.75
FDPS-204	ENST00000461507	NOTCH1	P46531	2555 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	TRAV39	A0A0B4J263	110 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	C17orf98	A8MV24	154 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	MCRIP1	C9JLW8	97 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	PDCD5	O14737	125 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	KCNAB3	O43448	404 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	TNFAIP8	O95379	198 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	CSN2	P05814	226 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	UBB	P0CG47	229 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	IGHV1-8	P0DP01	117 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	CDK2	P24941	298 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	NFYB	P25208	207 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	ERP29	P30040	261 aa	Known RBP	10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	HES5	Q5TA89	166 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	GDPGP1	Q6ZNW5	385 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	TMEM104	Q8NE00	496 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	OR6M1	Q8NGM8	313 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	NDNF	Q8TB73	568 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	PLPPR1	Q8TBJ4	325 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	MRGPRD	Q8TDS7	321 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	CCDC107	Q8WV48	283 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	TMEM59	Q9BXS4	323 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	DPAGT1	Q9H3H5	408 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	SPACA1	Q9HBV2	294 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	ETAA1	Q9NY74	926 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	GHRL	Q9UBU3	117 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	PEX16	Q9Y5Y5	336 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	SESN1	Q9Y6P5	492 aa		10.34	□□□□□ -0.75
FDPS-204	ENST00000461507	LOC100506127	A0A0U1RQW1	187 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	TMEM30CP	A0ZSE6	113 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	UBE2QL1	A1L167	161 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	SMIM30	A4D0T7	59 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	ARSB	P15848	533 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	PAX6	P26367	422 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	DLX6	P56179	175 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	CLDN12	P56749	244 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	PROK1	P58294	105 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	KRTAP10-3	P60369	221 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	RBM39	Q14498	530 aa	Known RBP	10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	NHLRC3	Q5JS37	347 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	RAB12	Q6IQ22	244 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	TSPAN14	Q8NG11	270 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	OR13A1	Q8NGR1	328 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	LINC01006	Q8NI28	216 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	MRPS24	Q96EL2	167 aa	Known RBP	10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	NEDD4L	Q96PU5	975 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	C16orf95	Q9H693	158 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	VPREB3	Q9UKI3	123 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	STUB1	Q9UNE7	303 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	SSR3	Q9UNL2	185 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507		V9GY05	133 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507	VWF	P04275	2813 aa		10.33	□□□□□ -0.76
FDPS-204	ENST00000461507		A0A087WXM4	84 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	TRDV1	A0A1B0GX56	115 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	ZNF729	A6NN14	1252 aa	Predicted RBP	10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	AIP	O00170	330 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	TOR1A	O14656	332 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	MMP23A	O75900	390 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	BPNT1	O95861	308 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	RBP4	P02753	201 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	VSIG8	P0DPA2	414 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	KCNJ3	P48549	501 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	SRSF4	Q08170	494 aa	Known RBP	10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	MIDN	Q504T8	468 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	RSBN1	Q5VWQ0	802 aa	Predicted RBP	10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	OR52W1	Q6IF63	320 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	HCP5	Q6MZN7	132 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507		Q6ZSV7	163 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	PRR18	Q8N4B5	295 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	ZNF565	Q8N9K5	539 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507		Q8NFD4	153 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	RFESD	Q8TAC1	157 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	KCNG3	Q8TAE7	436 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	UBALD1	Q8TB05	177 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	C17orf50	Q8WW18	174 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	CHCHD6	Q9BRQ6	235 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	CLEC7A	Q9BXN2	247 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	TMEM133	Q9H2Q1	129 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	TAS2R3	Q9NYW6	316 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	CALY	Q9NYX4	217 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	TRAPPC2L	Q9UL33	140 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	RNF114	Q9Y508	228 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	DSCAML1	Q8TD84	2053 aa		10.32	□□□□□ -0.76
FDPS-204	ENST00000461507	IGHV2-26	A0A0B4J1V2	119 aa		10.31	□□□□□ -0.76
FDPS-204	ENST00000461507	SLC17A2	O00624	439 aa		10.31	□□□□□ -0.76
FDPS-204	ENST00000461507	SLC22A1	O15245	554 aa		10.31	□□□□□ -0.76
FDPS-204	ENST00000461507	TSPAN9	O75954	239 aa		10.31	□□□□□ -0.76
FDPS-204	ENST00000461507	IGHV3-7	P01780	117 aa		10.31	□□□□□ -0.76
FDPS-204	ENST00000461507	RAB3B	P20337	219 aa		10.31	□□□□□ -0.76
FDPS-204	ENST00000461507	SSTR5	P35346	364 aa		10.31	□□□□□ -0.76
FDPS-204	ENST00000461507	PSMD7	P51665	324 aa		10.31	□□□□□ -0.76
FDPS-204	ENST00000461507	OR10A3	P58181	314 aa		10.31	□□□□□ -0.76
FDPS-204	ENST00000461507	FAM189A2	Q15884	450 aa		10.31	□□□□□ -0.76
FDPS-204	ENST00000461507	LY6E	Q16553	131 aa		10.31	□□□□□ -0.76
FDPS-204	ENST00000461507	C1orf100	Q5SVJ3	147 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms