RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 C11orf91Q3C1V1 193 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 ZNF260Q3ZCT1 412 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 CYB5R2Q6BCY4 276 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 BTNL3Q6UXE8 466 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 TCF23Q7RTU1 214 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 GLCCI1Q86VQ1 547 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 OR4K15Q8NH41 348 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 C8orf46Q8TAG6 207 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 SETD6Q8TBK2 473 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 MRPL30Q8TCC3 161 aaKnown RBP8.4□□□□□ -1.06
UPF2-204ENST00000460569 CCDC107Q8WV48 283 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 NUDCD2Q8WVJ2 157 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 TMEM186Q96B77 213 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 DIRAS2Q96HU8 199 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 HDHD3Q9BSH5 251 aaPredicted RBP8.4□□□□□ -1.06
UPF2-204ENST00000460569 AUNIPQ9H7T9 357 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 C12orf4Q9NQ89 552 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.4□□□□□ -1.06
UPF2-204ENST00000460569 MMP26Q9NRE1 261 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 HIF1ANQ9NWT6 349 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 PTTG2Q9NZH5 202 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 OR6C3Q9NZP0 311 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 ONECUT1Q9UBC0 465 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 ELF5Q9UKW6 265 aaPredicted RBP8.4□□□□□ -1.06
UPF2-204ENST00000460569 MRPS7Q9Y2R9 242 aaKnown RBP8.4□□□□□ -1.06
UPF2-204ENST00000460569 KCNK7Q9Y2U2 307 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 POLR3KQ9Y2Y1 108 aaPredicted RBP8.4□□□□□ -1.06
UPF2-204ENST00000460569 LINC00312Q9Y6C7 94 aa8.4□□□□□ -1.06
UPF2-204ENST00000460569 KIAA2026Q5HYC2 2103 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 TRAV39A0A0B4J263 110 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 A0A1W2PPH5 198 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 MT-ND4P03905 459 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 LIPFP07098 398 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 INHBBP09529 407 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 PTHLHP12272 177 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 CD99P14209 185 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 CCL3L1P16619 93 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 TNFSF8P32971 234 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 PAX2Q02962 417 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 PNLIPRP3Q17RR3 467 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 DCAF12L2Q5VW00 463 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 HACD4Q5VWC8 232 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 TMEM200BQ69YZ2 307 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 SNX29P2Q8IUI4 249 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 LY6G5BQ8NDX9 201 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 OR13A1Q8NGR1 328 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 MRGPRDQ8TDS7 321 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 GCDHQ92947 438 aaPredicted RBP8.39□□□□□ -1.07
UPF2-204ENST00000460569 DACT3Q96B18 629 aaPredicted RBP8.39□□□□□ -1.07
UPF2-204ENST00000460569 ZNF714Q96N38 554 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 WDFY2Q96P53 400 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 TRAPPC2LQ9UL33 140 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 INSIG2Q9Y5U4 225 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 WNK2Q9Y3S1 2297 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 ACANP16112 2415 aa8.39□□□□□ -1.07
UPF2-204ENST00000460569 ABCA1O95477 2261 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 A0A0G2JMP0 313 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 A0A0X1KG70 313 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 KIR2DS1A0A191URI9 304 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 NAPSAO96009 420 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 ZNF728P0DKX0 622 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 RCC1P18754 421 aaPredicted RBP8.38□□□□□ -1.07
UPF2-204ENST00000460569 DVL1P1P54792 670 aaPredicted RBP8.38□□□□□ -1.07
UPF2-204ENST00000460569 ARF6P62330 175 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 PITPNAQ00169 270 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 KRTAP1-1Q07627 177 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 IL18Q14116 193 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 RNASE12Q5GAN4 147 aaKnown RBP8.38□□□□□ -1.07
UPF2-204ENST00000460569 C6orf183Q5T699 404 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 FAM131AQ6UXB0 335 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 BAIAP2L2Q6UXY1 529 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 MOB1BQ7L9L4 216 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 GAPTQ8N292 157 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 OR4M2Q8NGB6 313 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 OR6Q1Q8NGQ2 317 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 TMUB1Q9BVT8 246 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 GAL3ST2Q9H3Q3 398 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 RIMS4Q9H426 269 aaPredicted RBP8.38□□□□□ -1.07
UPF2-204ENST00000460569 NCOR1P1Q9H4R4 102 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 UBE2J1Q9Y385 318 aaPredicted RBP8.38□□□□□ -1.07
UPF2-204ENST00000460569 MAST4O15021 2626 aa8.38□□□□□ -1.07
UPF2-204ENST00000460569 TRBV6-6A0A0A6YYG2 114 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 MEIS3P1A6NDR6 274 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 ZNF729A6NN14 1252 aaPredicted RBP8.37□□□□□ -1.07
UPF2-204ENST00000460569 CD5LO43866 347 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 SSX5O60225 188 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 HLA-DQB1P01920 261 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 MELTFP08582 738 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 FCGR3AP08637 254 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 GATA3P23771 443 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 PRSS3P35030 304 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 SSTR5P35346 364 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 GUCA2AQ02747 115 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 SPANXN2Q5MJ10 180 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 METTL11BQ5VVY1 283 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 FAHD2BQ6P2I3 314 aaPredicted RBP8.37□□□□□ -1.07
UPF2-204ENST00000460569 TRAT1Q6PIZ9 186 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 Q6ZPA2 131 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 PRR18Q8N4B5 295 aa8.37□□□□□ -1.07
UPF2-204ENST00000460569 KIR3DL3Q8N743 410 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms