RNA–Protein interactions for RNA: ENST00000456224.7

SCN11A-203, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-203ENST00000456224 GAPTQ8N292 157 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 TMEM251Q8N6I4 163 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 UBAC2Q8NBM4 344 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 POC1AQ8NBT0 407 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 OR10X1Q8NGY0 326 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 LRRC29Q8WV35 223 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 OR5P3Q8WZ94 311 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 FBXO17Q96EF6 278 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 OR2D2Q9H210 308 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 Q9N2K0 584 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 TREM2Q9NZC2 230 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 TUBD1Q9UJT1 453 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 hCG_38984A0A1B0GV85 526 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 hADV38S2A0JD32 116 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 ZFP92A6NM28 416 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 K7EQM0 130 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 SRSF10O75494 262 aaKnown RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 UMODP07911 640 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 HLA-GP17693 338 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 DYNLT3P51808 116 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 TMEM187Q14656 261 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 SNAI3Q3KNW1 292 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 NR2C2APQ86WQ0 139 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 KDF1Q8NAX2 398 aaPredicted RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 DEFB124Q8NES8 71 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 OR2Z1Q8NG97 314 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 OR5C1Q8NGR4 320 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 OR4S2Q8NH73 311 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 MRPL24Q96A35 216 aaKnown RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 CTDSP1Q9GZU7 261 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 WDR13Q9H1Z4 485 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 COLQQ9Y215 455 aaPredicted RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 NUMA1Q14980 2115 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 RBFOX3A6NFN3 312 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 MPTX1A8MV57 137 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 NDUFB3O43676 98 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 ADAM11O75078 769 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 NXPH3O95157 252 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 HEXAP06865 529 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 HIST1H3AP68431 136 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 UNC119Q13432 240 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 VMA21Q3ZAQ7 101 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 HIST2H3PS2Q5TEC6 136 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 DCAF12L2Q5VW00 463 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 ZNF660Q6AZW8 331 aaPredicted RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 ASPHD2Q6ICH7 369 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 DHRS11Q6UWP2 260 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 FAM90A1Q86YD7 464 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 ZNF808Q8N4W9 903 aaPredicted RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 OR2I1PQ8NGU4 316 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 C5orf66Q9H5L9 145 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 GNG13Q9P2W3 67 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 A0A0B4J293 547 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 PATE3B3GLJ2 98 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 EREGO14944 169 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 LDLRAD4O15165 306 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 SYNGR2O43760 224 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 PTGDSP41222 190 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 ELLP55199 621 aaPredicted RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 SRSF4Q08170 494 aaKnown RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 ADIRFQ15847 76 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 SPATA46Q5T0L3 261 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 TSPO2Q5TGU0 170 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 PEAR1Q5VY43 1037 aaPredicted RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 RPL7L1Q6DKI1 246 aaKnown RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 FAM214BQ7L5A3 538 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 SELENOHQ8IZQ5 122 aaKnown RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 FAM89BQ8N5H3 189 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 GTF3AQ92664 365 aaKnown RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 SDSLQ96GA7 329 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 TMEM56Q96MV1 263 aa4.3□□□□□ -1.72
SCN11A-203ENST00000456224 LYRM2Q9NU23 88 aaPredicted RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 ZMAT5Q9UDW3 170 aaKnown RBP4.3□□□□□ -1.72
SCN11A-203ENST00000456224 UBE2L5PA0A1B0GUS4 154 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 LMX1BO60663 402 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 CELA2AP08217 269 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 TNFAIP6P98066 277 aaPredicted RBP4.29□□□□□ -1.72
SCN11A-203ENST00000456224 TMEM267Q0VDI3 215 aaPredicted RBP4.29□□□□□ -1.72
SCN11A-203ENST00000456224 ZNF816Q0VGE8 651 aaPredicted RBP4.29□□□□□ -1.72
SCN11A-203ENST00000456224 HIST3H3Q16695 136 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 NCR3LG1Q68D85 454 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 H1FXQ92522 213 aaKnown RBP4.29□□□□□ -1.72
SCN11A-203ENST00000456224 MARS2Q96GW9 593 aaKnown RBP4.29□□□□□ -1.72
SCN11A-203ENST00000456224 RNF7Q9UBF6 113 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 CACNG5Q9UF02 275 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 ELOA3CA0A087WX78 387 aaPredicted RBP4.29□□□□□ -1.72
SCN11A-203ENST00000456224 TRAV38-1A0A0B4J264 116 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 A0A1W2PN81 502 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 SHISA7A6NL88 538 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 ADAP1O75689 374 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 NDUFB7P17568 137 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 RAB5AP20339 215 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 CHRNA7P36544 502 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 UCP2P55851 309 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 H2BFSP57053 126 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 UBE2V2Q15819 145 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 HAGHQ16775 308 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 LTC4SQ16873 150 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 BTNL8Q6UX41 500 aa4.29□□□□□ -1.72
SCN11A-203ENST00000456224 GFRALQ6UXV0 394 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms