RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 GLCCI1Q86VQ1 547 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 NR2C2APQ86WQ0 139 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF584Q8IVC4 421 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 SLC38A6Q8IZM9 456 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 C17orf78Q8N4C9 275 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 OR5AU1Q8NGC0 362 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 MCFD2Q8NI22 146 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 TMEM106AQ96A25 262 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 FGGYQ96C11 551 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 PPP1R14BQ96C90 147 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 LYZL4Q96KX0 146 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 TSC22D3Q99576 134 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 KCNS3Q9BQ31 491 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 SLC30A2Q9BRI3 323 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 NXF2Q9GZY0 626 aaKnown RBP4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 RGCCQ9H4X1 137 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 GEMIN7Q9H840 131 aaKnown RBP4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 GPR84Q9NQS5 396 aa4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF275Q9NSD4 429 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 CCDC59Q9P031 241 aaKnown RBP4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 ERRFI1Q9UJM3 462 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 UTP20O75691 2785 aaKnown RBP4.36□□□□□ -1.71
HMGB1P4-201ENST00000455362 UBR5O95071 2799 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 TRAV8-7A0A075B6U6 113 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 IGHV4-28A0A0C4DH34 117 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 A0A1B0GVI7 797 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 LOC390937A0A1W2PQ73 354 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 A0A1W2PR80 420 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 LRRC30A6NM36 301 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 CCL21O00585 134 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 LMX1BO60663 402 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 NGFP01138 241 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 IGKV3-15P01624 115 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 CD2P06729 351 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 CRYGCP07315 174 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 FAM106CPP0CH98 169 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 CD37P11049 281 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 CCL2P13500 99 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 ARSBP15848 533 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF12P17014 697 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 IGFBP3P17936 291 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 RAB3BP20337 219 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 IL32P24001 234 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 MYL9P24844 172 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 APLNRP35414 380 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 BCAP31P51572 246 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 FOXI1Q12951 378 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 HNRNPA0Q13151 305 aaKnown RBP4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 MEF2DQ14814 521 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 SNAI3Q3KNW1 292 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF404Q494X3 552 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 FAM76BQ5HYJ3 339 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 PLCXD3Q63HM9 321 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 Q6YL49 198 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 LINC00299Q6ZSB3 139 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 RFPL4BQ6ZWI9 263 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 LRRTM1Q86UE6 522 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 RELL2Q8NC24 303 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 CCDC54Q8NEL0 328 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 SLC30A7Q8NEW0 376 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 OR5D14Q8NGL3 314 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 OR13C3Q8NGS6 347 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 MITD1Q8WV92 249 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 APOBEC3DQ96AK3 386 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 S100PBPQ96BU1 408 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 ADAT3Q96EY9 351 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 UHRF2Q96PU4 802 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 NEURL2Q9BR09 285 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 C1QTNF6Q9BXI9 259 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 SLITRK2Q9H156 845 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 ELOVL5Q9NYP7 299 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF391Q9UJN7 358 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 STARD10Q9Y365 291 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 AK6Q9Y3D8 172 aaKnown RBP4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 RNF115Q9Y4L5 304 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 SLC25A15Q9Y619 301 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 NPTNQ9Y639 398 aa4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 HELZ2Q9BYK8 2649 aaKnown RBP4.35□□□□□ -1.71
HMGB1P4-201ENST00000455362 HCFC1P51610 2035 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 LRBAP50851 2863 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 SMCO3A2RU48 225 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 A6NIN4 97 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 DHRS7CA6NNS2 312 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 EEF1E1-BLOC1S5C9J1V9 151 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 C16orf97H3BN30 126 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 PDCD5O14737 125 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 EEF1E1O43324 174 aaKnown RBP4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 XRCC2O43543 280 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 DHRS3O75911 302 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 IGLV1-44P01699 117 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 STAG3L2P0CL84 134 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 ZNF35P13682 527 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 MYOD1P15172 320 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 CCNOP22674 350 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 CHRNB4P30926 498 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 DDOSTP39656 456 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 IDH3GP51553 393 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 OR10A3P58181 314 aa4.34□□□□□ -1.71
HMGB1P4-201ENST00000455362 FAM3AP98173 230 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms