RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 H3BP45 60 aa12.34□□□□□ -0.43
MSH5-206ENST00000423982 FABP4P15090 132 aa12.34□□□□□ -0.43
MSH5-206ENST00000423982 ZNF154Q13106 437 aa12.34□□□□□ -0.43
MSH5-206ENST00000423982 EIF3IQ13347 325 aaKnown RBP12.34□□□□□ -0.43
MSH5-206ENST00000423982 SPIN3Q5JUX0 258 aa12.34□□□□□ -0.43
MSH5-206ENST00000423982 ATP1A1-AS1Q5TC04 95 aa12.34□□□□□ -0.43
MSH5-206ENST00000423982 RTL6Q6ICC9 239 aa12.34□□□□□ -0.43
MSH5-206ENST00000423982 ZNF774Q6NX45 483 aa12.34□□□□□ -0.43
MSH5-206ENST00000423982 ADPRHL1Q8NDY3 354 aa12.34□□□□□ -0.43
MSH5-206ENST00000423982 FRZBQ92765 325 aa12.34□□□□□ -0.43
MSH5-206ENST00000423982 WDR54Q9H977 334 aa12.34□□□□□ -0.43
MSH5-206ENST00000423982 CALHM2Q9HA72 323 aa12.34□□□□□ -0.43
MSH5-206ENST00000423982 C19orf25Q9UFG5 118 aaPredicted RBP12.34□□□□□ -0.43
MSH5-206ENST00000423982 A0A1B0GW64 132 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 TM4SF5O14894 197 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 ADAM20O43506 726 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 CEACAM1P13688 526 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 OTX1P32242 354 aaPredicted RBP12.33□□□□□ -0.44
MSH5-206ENST00000423982 HERV-K104P61576 105 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 VASH2Q86V25 355 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 HIST3H2BBQ8N257 126 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 RNF138Q8WVD3 245 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 ZPBPQ9BS86 351 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 MPPED1O15442 326 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 TLX3O43711 291 aaPredicted RBP12.33□□□□□ -0.44
MSH5-206ENST00000423982 APC2O95996 2303 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 F10P00742 488 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 PPYP01298 95 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 TRGC1P0CF51 173 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 DTYMKP23919 212 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 GNRHRP30968 328 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 CHD3Q12873 2000 aaKnown RBP12.33□□□□□ -0.44
MSH5-206ENST00000423982 PCOLCEQ15113 449 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 ZNF468Q5VIY5 522 aaPredicted RBP12.33□□□□□ -0.44
MSH5-206ENST00000423982 OR2T2Q6IF00 324 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 DMRTC2Q8IXT2 367 aaPredicted RBP12.33□□□□□ -0.44
MSH5-206ENST00000423982 SSX3Q99909 188 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 ANGPTL4Q9BY76 406 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 KIAA1456Q9P272 454 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 FOXD3Q9UJU5 478 aaPredicted RBP12.33□□□□□ -0.44
MSH5-206ENST00000423982 TMED3Q9Y3Q3 217 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 ARHGAP21Q5T5U3 1957 aa12.33□□□□□ -0.44
MSH5-206ENST00000423982 ZZEF1O43149 2961 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 DHHO43323 396 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 LCATP04180 440 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 COX6A1P12074 109 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 TLE1Q04724 770 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 DAZAP2Q15038 168 aaPredicted RBP12.32□□□□□ -0.44
MSH5-206ENST00000423982 TBC1D26Q86UD7 250 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 BORCS8Q96FH0 119 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 SYT3Q9BQG1 590 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 ZNF442Q9H7R0 627 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 ZNF286AQ9HBT8 521 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 SLC7A10Q9NS82 523 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 UBE2J1Q9Y385 318 aaPredicted RBP12.32□□□□□ -0.44
MSH5-206ENST00000423982 ACACAQ13085 2346 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 IGHV1-45A0A0A0MS14 117 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 TRDCB7Z8K6 153 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 PITX3O75364 302 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 NPBWR2P48146 333 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 RPL23AP62750 156 aaKnown RBP12.32□□□□□ -0.44
MSH5-206ENST00000423982 ZNF266Q14584 549 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 TVP23CQ96ET8 276 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 RASL10BQ96S79 203 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 NIPSNAP3BQ9BS92 247 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 DEFB126Q9BYW3 111 aa12.32□□□□□ -0.44
MSH5-206ENST00000423982 SEC14L6B5MCN3 397 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 ZNF587BE7ETH6 402 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 PPP1R2P9O14990 202 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 OR7C1O76099 320 aaPredicted RBP12.31□□□□□ -0.44
MSH5-206ENST00000423982 HIST1H1BP16401 226 aaKnown RBP12.31□□□□□ -0.44
MSH5-206ENST00000423982 MSX1P28360 303 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 RBP2P50120 134 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 IZUMO4Q1ZYL8 232 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 CALHM1Q8IU99 346 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 ZNF695Q8IW36 515 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 OSR2Q8N2R0 312 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 CLDND2Q8NHS1 167 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 SPRY4Q9C004 299 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 TMEM222Q9H0R3 208 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 IGF2RP11717 2491 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 MAP1BP46821 2468 aaKnown RBP12.31□□□□□ -0.44
MSH5-206ENST00000423982 C3orf80F5H4A9 247 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 HSPB6O14558 160 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 DKK1O94907 266 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 NTF4P34130 210 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 NKX6-1P78426 367 aaPredicted RBP12.31□□□□□ -0.44
MSH5-206ENST00000423982 MPV17LQ2QL34 196 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 KIAA2026Q5HYC2 2103 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 PPP1R32Q7Z5V6 425 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 HS3ST6Q96QI5 342 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 ULBP2Q9BZM5 246 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 PLEKHF2Q9H8W4 249 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 LYRM2Q9NU23 88 aaPredicted RBP12.31□□□□□ -0.44
MSH5-206ENST00000423982 GNG13Q9P2W3 67 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 NCOR2Q9Y618 2525 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 CHD8Q9HCK8 2581 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 DIDO1Q9BTC0 2240 aaKnown RBP12.31□□□□□ -0.44
MSH5-206ENST00000423982 NPIPA2E9PIF3 369 aa12.31□□□□□ -0.44
MSH5-206ENST00000423982 NPIPA3F8WFD2 350 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms