RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 IGF2P01344 180 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 IGHG3P01860 377 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 TCRBP04435 133 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 IL5P05113 134 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 CD2P06729 351 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 CD79AP11912 226 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 RAB5AP20339 215 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 FGF9P31371 208 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-202ENST00000409915 DUTP33316 252 aaKnown RBP3.89□□□□□ -1.79
SF3B1-202ENST00000409915 IFNGR2P38484 337 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 GLP1RP43220 463 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 ATP1B3P54709 279 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM33P57088 247 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 PLP1P60201 277 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 NAAAQ02083 359 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF117Q03924 483 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 TPBGQ13641 420 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 RSU1Q15404 277 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 HMGN3Q15651 99 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 MAPK14Q16539 360 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 MRPL23Q16540 153 aaKnown RBP3.89□□□□□ -1.79
SF3B1-202ENST00000409915 BCL2L15Q5TBC7 163 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 BTNL3Q6UXE8 466 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 LRRN1Q6UXK5 716 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 IL34Q6ZMJ4 242 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 FRRS1Q6ZNA5 592 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 AHSA2Q719I0 299 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 H2BFWTQ7Z2G1 175 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 ZFP82Q8N141 532 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 NPEPL1Q8NDH3 523 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 ATP6V1C2Q8NEY4 427 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 STXBP6Q8NFX7 210 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 OR2M3Q8NG83 312 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 OR4K17Q8NGC6 315 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 OR8J3Q8NGG0 315 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 OR5D18Q8NGL1 313 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 OR10K1Q8NGX5 313 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 OR56B4Q8NH76 319 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 FAM57AQ8TBR7 257 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 GNPDA2Q8TDQ7 276 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 SLC25A43Q8WUT9 341 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-202ENST00000409915 MAL2Q969L2 176 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF524Q96C55 264 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 NTNG2Q96CW9 530 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 CMBLQ96DG6 245 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM19Q96HH6 336 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 ITCHQ96J02 903 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 ALKBH3Q96Q83 286 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-202ENST00000409915 STACQ99469 402 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 SDF2Q99470 211 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 S1PR3Q99500 378 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 MGLLQ99685 303 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 TM2D2Q9BX73 214 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 IKZF5Q9H5V7 419 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 RNF167Q9H6Y7 350 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 TPT1P8Q9HAU6 139 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 B3GAT2Q9NPZ5 323 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 SLC2A9Q9NRM0 540 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 PLEK2Q9NYT0 353 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 SLC25A37Q9NYZ2 338 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 DKKL1Q9UK85 242 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 VDAC3Q9Y277 283 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 ZFP30Q9Y2G7 519 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 TIMM10BQ9Y5J6 103 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 FLVCR1Q9Y5Y0 555 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 KPTNQ9Y664 436 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 V9GYS6 101 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 NINQ8N4C6 2090 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 NBPF19A0A087WUL8 3843 aa3.89□□□□□ -1.79
SF3B1-202ENST00000409915 SPTAN1Q13813 2472 aaKnown RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 A0A096LPI6 279 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 TRBV5-3A0A0A0MS03 114 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 A0A0D9SG52 128 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 CLEC18AA5D8T8 446 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 H3BTX0 84 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 CCL21O00585 134 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 CCSO14618 274 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 PRRG2O14669 202 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 GPR137BO60478 399 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 OR2J3O76001 311 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 NUDT14O95848 222 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 TOMM40O96008 361 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 IFNA21P01568 189 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 HPNP05981 417 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 BCHEP06276 602 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 SERPINE2P07093 398 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 SCGB1A1P11684 91 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF14P17017 642 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 PSMA1P25786 263 aaKnown RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 HTR2CP28335 458 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 C21orf33P30042 268 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-202ENST00000409915 SFTPDP35247 375 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 CA7P43166 264 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 DAPP51397 102 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 CDH11P55287 796 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 ATP5J2P56134 94 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 DLX5P56178 289 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 MTPNP58546 118 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 AP3S2P59780 193 aa3.88□□□□□ -1.79
SF3B1-202ENST00000409915 OR2B8PP59922 312 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms