RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 DUSP13Q9UII6 198 aa17.52■□□□□ 0.4
USP39-203ENST00000409470 MAP1BP46821 2468 aaKnown RBP17.52■□□□□ 0.39
USP39-203ENST00000409470 TRBV6-7A0A0A0MS04 114 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 TUBAL3A6NHL2 446 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 A8MXE2 369 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 PHF1O43189 567 aaPredicted RBP17.52■□□□□ 0.39
USP39-203ENST00000409470 HAND1O96004 215 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 GNRHRP30968 328 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 FAM27E3Q08E93 113 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 LIAT1Q6ZQX7 453 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 FAM185AQ8N0U4 392 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 PLPPR1Q8TBJ4 325 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 SLC5A7Q9GZV3 580 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 HES4Q9HCC6 221 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 GLS2Q9UI32 602 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 PCDHB10Q9UN67 800 aa17.52■□□□□ 0.39
USP39-203ENST00000409470 LEUTXA8MZ59 168 aa17.51■□□□□ 0.39
USP39-203ENST00000409470 WNT9BO14905 357 aa17.51■□□□□ 0.39
USP39-203ENST00000409470 NUP62P37198 522 aaPredicted RBP17.51■□□□□ 0.39
USP39-203ENST00000409470 ZNF497Q6ZNH5 498 aa17.51■□□□□ 0.39
USP39-203ENST00000409470 FAM219AQ8IW50 185 aa17.51■□□□□ 0.39
USP39-203ENST00000409470 OR10J5Q8NHC4 309 aa17.51■□□□□ 0.39
USP39-203ENST00000409470 ST8SIA2Q92186 375 aa17.51■□□□□ 0.39
USP39-203ENST00000409470 ZNF471Q9BX82 626 aaPredicted RBP17.51■□□□□ 0.39
USP39-203ENST00000409470 OR5AC2Q9NZP5 309 aa17.51■□□□□ 0.39
USP39-203ENST00000409470 TRAPPC2LQ9UL33 140 aa17.51■□□□□ 0.39
USP39-203ENST00000409470 RP1L1Q8IWN7 2480 aaPredicted RBP17.51■□□□□ 0.39
USP39-203ENST00000409470 CEP295Q9C0D2 2601 aa17.51■□□□□ 0.39
USP39-203ENST00000409470 hCG_1807616A0A1W2PRN6 198 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 MPPED1O15442 326 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 TUSC2O75896 110 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 MZT1Q08AG7 82 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 IL15RAQ13261 267 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 C3orf36Q3SXR2 165 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 SHEQ5VZ18 495 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 MOB1BQ7L9L4 216 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 LGI3Q8N145 548 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 TLNRD1Q9H1K6 362 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 SH3BGRL2Q9UJC5 107 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 FBXO9Q9UK97 447 aaPredicted RBP17.5■□□□□ 0.39
USP39-203ENST00000409470 DMXL2Q8TDJ6 3036 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 CEBPDP49716 269 aaPredicted RBP17.5■□□□□ 0.39
USP39-203ENST00000409470 WDR82Q6UXN9 313 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 FOXRED2Q8IWF2 684 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 OR2Z1Q8NG97 314 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 GLYATL2Q8WU03 294 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 IL1F10Q8WWZ1 152 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 KIRREL1Q96J84 757 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 ARPC5LQ9BPX5 153 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 PIGMQ9H3S5 423 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 KIF25Q9UIL4 384 aa17.5■□□□□ 0.39
USP39-203ENST00000409470 TRAV39A0A0B4J263 110 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 IGKV1D-13A0A0B4J2D9 117 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 A0A0G2JNJ9 132 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 C3orf85A0A1B0GTC6 90 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 POM121CA8CG34 1229 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 F5H0A9 414 aaPredicted RBP17.49■□□□□ 0.39
USP39-203ENST00000409470 GPR31O00270 319 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 IGKV1-13P0DP09 117 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 KCNJ3P48549 501 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 LUMP51884 338 aaPredicted RBP17.49■□□□□ 0.39
USP39-203ENST00000409470 VHLLQ6RSH7 139 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 PCSK4Q6UW60 755 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 ZNF818PQ6ZRF7 136 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 LRP11Q86VZ4 500 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 GAPTQ8N292 157 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 LRTM2Q8N967 370 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 MSI2Q96DH6 328 aaKnown RBP17.49■□□□□ 0.39
USP39-203ENST00000409470 TAAR3PQ9P1P4 343 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 Q9UFV3 132 aa17.49■□□□□ 0.39
USP39-203ENST00000409470 HSD17B6O14756 317 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 RLN2P04090 185 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 FAM87AP0C7U9 286 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 LYL1P12980 280 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 MSMPQ1L6U9 139 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 ESCO2Q56NI9 601 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 LYZL2Q7Z4W2 148 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 TBC1D26Q86UD7 250 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 COMMD7Q86VX2 200 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 PRR18Q8N4B5 295 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 SNRNP40Q96DI7 357 aaKnown RBP17.48■□□□□ 0.39
USP39-203ENST00000409470 RRNAD1Q96FB5 475 aaKnown RBP17.48■□□□□ 0.39
USP39-203ENST00000409470 TP53RKQ96S44 253 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 GLRXP35754 106 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 TMPRSS3P57727 454 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 MEX3BQ6ZN04 569 aaKnown RBP17.48■□□□□ 0.39
USP39-203ENST00000409470 ACP7Q6ZNF0 438 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 OR1S1Q8NH92 325 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 C18orf12Q96KH6 178 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 CABLES2Q9BTV7 478 aa17.48■□□□□ 0.39
USP39-203ENST00000409470 ZNF250P15622 560 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 RND3P61587 244 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 HOXA4Q00056 320 aaPredicted RBP17.47■□□□□ 0.39
USP39-203ENST00000409470 SMCO1Q147U7 214 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 MRGPRGQ86SM5 289 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 CCL28Q9NRJ3 127 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 TUBD1Q9UJT1 453 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 UBE2J1Q9Y385 318 aaPredicted RBP17.47■□□□□ 0.39
USP39-203ENST00000409470 OR2W1Q9Y3N9 320 aa17.47■□□□□ 0.39
USP39-203ENST00000409470 AUP1Q9Y679 476 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms