RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 TCF19Q9Y242 345 aa14.14□□□□□ -0.15
UPK3A-202ENST00000396082 LSM2Q9Y333 95 aaKnown RBP14.14□□□□□ -0.15
UPK3A-202ENST00000396082 TMEM30CPA0ZSE6 113 aa14.13□□□□□ -0.15
UPK3A-202ENST00000396082 MEGF11A6BM72 1044 aa14.13□□□□□ -0.15
UPK3A-202ENST00000396082 ARHGDIBP52566 201 aa14.13□□□□□ -0.15
UPK3A-202ENST00000396082 PRRX1P54821 245 aa14.13□□□□□ -0.15
UPK3A-202ENST00000396082 RBM39Q14498 530 aaKnown RBP14.13□□□□□ -0.15
UPK3A-202ENST00000396082 INSL4Q14641 139 aa14.13□□□□□ -0.15
UPK3A-202ENST00000396082 IRF3Q14653 427 aa14.13□□□□□ -0.15
UPK3A-202ENST00000396082 LTC4SQ16873 150 aa14.13□□□□□ -0.15
UPK3A-202ENST00000396082 RBM48Q5RL73 367 aaKnown RBP14.13□□□□□ -0.15
UPK3A-202ENST00000396082 LIPKQ5VXJ0 399 aa14.13□□□□□ -0.15
UPK3A-202ENST00000396082 ZNF286AQ9HBT8 521 aa14.13□□□□□ -0.15
UPK3A-202ENST00000396082 DPM3Q9P2X0 92 aa14.13□□□□□ -0.15
UPK3A-202ENST00000396082 BLOC1S6Q9UL45 172 aa14.13□□□□□ -0.15
UPK3A-202ENST00000396082 LEUTXA8MZ59 168 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 H3BUI4 141 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 CHST1O43916 411 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 CRTAPO75718 401 aaPredicted RBP14.12□□□□□ -0.15
UPK3A-202ENST00000396082 ATP6V1G2O95670 118 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 IL1AP01583 271 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 CRHBPP24387 322 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 CEACAM3P40198 252 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 PROK1P58294 105 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 GPR50Q13585 617 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 HSD17B12Q53GQ0 312 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 FAM27D1Q5T7N8 215 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 CEACAM19Q7Z692 300 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 TMEM219Q86XT9 240 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 OR2T6Q8NHC8 308 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 PIFOQ8TCI5 191 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 CREB3L1Q96BA8 519 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 MRPS24Q96EL2 167 aaKnown RBP14.12□□□□□ -0.15
UPK3A-202ENST00000396082 KIRREL1Q96J84 757 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 UQCC2Q9BRT2 126 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 SELENOIQ9C0D9 397 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 BANF2Q9H503 90 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 RANBP3Q9H6Z4 567 aaPredicted RBP14.12□□□□□ -0.15
UPK3A-202ENST00000396082 ZNF696Q9H7X3 374 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 SPACA1Q9HBV2 294 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 IDI2-AS1Q9NZ38 188 aa14.12□□□□□ -0.15
UPK3A-202ENST00000396082 TRAV39A0A0B4J263 110 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 MGMTP16455 207 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 JUNBP17275 347 aaPredicted RBP14.11□□□□□ -0.15
UPK3A-202ENST00000396082 CD34P28906 385 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 DYNLT3P51808 116 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 PAX5Q02548 391 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 HLA-DRB5Q30154 266 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 PRR31Q5SQ13 230 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 GLT8D1Q68CQ7 371 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 PRSS48Q7RTY5 328 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 DTX3Q8N9I9 347 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 OR9G1Q8NH87 305 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 TMEM203Q969S6 136 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 CITED1Q99966 193 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 CST11Q9H112 138 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 FBLN5Q9UBX5 448 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 RAB26Q9ULW5 256 aa14.11□□□□□ -0.15
UPK3A-202ENST00000396082 A0A087X0M5 115 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 A0A1B0GX30 115 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 A6NDX4 124 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 MCRIP1C9JLW8 97 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 TIMM23O14925 209 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 IGLV1-47P01700 117 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 BRS3P32247 399 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 SSTR5P35346 364 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 VHLP40337 213 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 UNQ9370/PRO34162Q6UXP9 181 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 RFESDQ8TAC1 157 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 CCDC107Q8WV48 283 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 PHYHIPQ92561 330 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 FAM46BQ96A09 425 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 SIGLEC9Q9Y336 463 aa14.1□□□□□ -0.15
UPK3A-202ENST00000396082 AMMECR1Q9Y4X0 333 aaPredicted RBP14.1□□□□□ -0.15
UPK3A-202ENST00000396082 AIPO00170 330 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 IGHV3-7P01780 117 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 CGB3P0DN86 165 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 CGB7P0DN87 165 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 KIR2DS4P43632 304 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 MAP2K4P45985 399 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 GNG10P50151 68 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 MLLT11Q13015 90 aaPredicted RBP14.09□□□□□ -0.15
UPK3A-202ENST00000396082 TRAM1Q15629 374 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 ARSJQ5FYB0 599 aaPredicted RBP14.09□□□□□ -0.15
UPK3A-202ENST00000396082 RAB12Q6IQ22 244 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 TMEM104Q8NE00 496 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 MMP28Q9H239 520 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 ISYNA1Q9NPH2 558 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 GHRLQ9UBU3 117 aa14.09□□□□□ -0.15
UPK3A-202ENST00000396082 FAM90A10PA6NDY2 464 aa14.08□□□□□ -0.16
UPK3A-202ENST00000396082 FAM90A18PA6NE21 464 aa14.08□□□□□ -0.16
UPK3A-202ENST00000396082 FAM90A16PA6NEW6 464 aa14.08□□□□□ -0.16
UPK3A-202ENST00000396082 FAM90A20PA6NIJ5 464 aa14.08□□□□□ -0.16
UPK3A-202ENST00000396082 FAM90A7PA6NKC0 464 aa14.08□□□□□ -0.16
UPK3A-202ENST00000396082 FAM90A22PA8MWA6 464 aa14.08□□□□□ -0.16
UPK3A-202ENST00000396082 FAM90A12PA8MX19 464 aa14.08□□□□□ -0.16
UPK3A-202ENST00000396082 FAM90A5PA8MXJ8 464 aa14.08□□□□□ -0.16
UPK3A-202ENST00000396082 FAM90A23PA8MXZ1 464 aa14.08□□□□□ -0.16
UPK3A-202ENST00000396082 NPIPB11E5RHQ5 1161 aa14.08□□□□□ -0.16
UPK3A-202ENST00000396082 BUB1B-PAK6H3BSN5 160 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms