RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 SPATA24Q86W54 205 aa4.9□□□□□ -1.62
SMARCAD1-203ENST00000394961 ZNF565Q8N9K5 539 aa4.9□□□□□ -1.62
SMARCAD1-203ENST00000394961 OR2T10Q8NGZ9 312 aa4.9□□□□□ -1.62
SMARCAD1-203ENST00000394961 NDNFQ8TB73 568 aa4.9□□□□□ -1.62
SMARCAD1-203ENST00000394961 PAK1IP1Q9NWT1 392 aaPredicted RBP4.9□□□□□ -1.62
SMARCAD1-203ENST00000394961 N6AMT1Q9Y5N5 214 aa4.9□□□□□ -1.62
SMARCAD1-203ENST00000394961 TRBV6-6A0A0A6YYG2 114 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 NDUFA3O95167 84 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 PSMB8P28062 276 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 ALDH3A2P51648 485 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 EDDM3BP56851 147 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 TEX38Q6PEX7 206 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 TMEM219Q86XT9 240 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 Q8N9W7 124 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 TOMM40LQ969M1 308 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 CIB1Q99828 191 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 MBNL3Q9NUK0 354 aaKnown RBP4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 GFOD1Q9NXC2 390 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 GHRLQ9UBU3 117 aa4.9□□□□□ -1.63
SMARCAD1-203ENST00000394961 GABRPO00591 440 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 DEGS1O15121 323 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 DIRAS3O95661 229 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 PF4P02776 101 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR5H8P0DN80 308 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 CDK2P24941 298 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR3A4PP47883 348 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 HTD2P86397 168 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 KIAA0141Q14154 515 aaPredicted RBP4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 KISS1Q15726 138 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 RPL22L1Q6P5R6 122 aaKnown RBP4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 CAPSLQ8WWF8 208 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 UBE2E2Q96LR5 201 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 IGHV1-3A0A0C4DH29 117 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 WI2-2373I1.2A0A1W2PRP0 233 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 H3BUA1 57 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 HLA-DRB1P01911 266 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 GABRR1P24046 479 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 RBM11P57052 281 aaKnown RBP4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 PNLIPRP3Q17RR3 467 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 KLK9Q2XQG4 91 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 NKAPLQ5M9Q1 402 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 ZNF880Q6PDB4 577 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 MINDY2Q8NBR6 621 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 ZNF485Q8NCK3 441 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR5M8Q8NGP6 311 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 RHOXF1Q8NHV9 184 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 OTULINQ96BN8 352 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 FGGYQ96C11 551 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 LGALS12Q96DT0 336 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR5M11Q96RB7 305 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 BARHL1Q9BZE3 327 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 PPIL3Q9H2H8 161 aaKnown RBP4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 KLK9Q9UKQ9 250 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 DNAH7Q8WXX0 4024 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 TRBV5-7A0A0A0MS05 114 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 TMEM30CPA0ZSE6 113 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 MITFO75030 526 aaPredicted RBP4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 SNRNP70P08621 437 aaKnown RBP4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 PIPP12273 146 aaPredicted RBP4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 PPIFP30405 207 aaKnown RBP4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 RANBP1P43487 201 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 MOGAT2Q3SYC2 334 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 ZNF695Q8IW36 515 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR13C3Q8NGS6 347 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 RTN4IP1Q8WWV3 396 aaPredicted RBP4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 SGCDQ92629 289 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 RNFT2Q96EX2 444 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 ERVK13-1Q9NX77 482 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 IL36RNQ9UBH0 155 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 NKX1-2Q9UD57 310 aaPredicted RBP4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 GAB2Q9UQC2 676 aa4.89□□□□□ -1.63
SMARCAD1-203ENST00000394961 PEX14O75381 377 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 TMEM11P17152 192 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 CAPGP40121 348 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 SSX1Q16384 188 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 C6orf183Q5T699 404 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR52N1Q8NH53 320 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 RPEQ96AT9 228 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 SIGLEC8Q9NYZ4 499 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 GNG8Q9UK08 70 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 HILPDAQ9Y5L2 63 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 DAPL1A0PJW8 107 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 HSD17B6O14756 317 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 MOSP00540 346 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 RAB3AP20336 220 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 ABCA11PQ4W5N1 156 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 C6orf141Q5SZD1 244 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 CD200R1LQ6Q8B3 271 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 ZNF833PQ6ZTB9 187 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 SLC35E3Q7Z769 313 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 PRR18Q8N4B5 295 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR10H4Q8NGA5 316 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 TRMT10AQ8TBZ6 339 aaKnown RBP4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 FBLIM1Q8WUP2 373 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 RAX2Q96IS3 184 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 S1PR3Q99500 378 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 SCOCQ9UIL1 159 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 JPT1Q9UK76 154 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 I3L521 148 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 RBBP9O75884 186 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms