RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PDCD1Q15116 288 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 RHOVQ96L33 236 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 NPTNQ9Y639 398 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 MRPS18BQ9Y676 258 aaKnown RBP17.31■□□□□ 0.36
SHANK1-203ENST00000391813 EPOPA6NHQ4 379 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 RPL24P83731 157 aaKnown RBP17.31■□□□□ 0.36
SHANK1-203ENST00000391813 ABHD14BQ96IU4 210 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 KCNMB2Q9Y691 235 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 IGHV3-15A0A0B4J1V0 119 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 DIRC3C9JPN6 131 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 LINC01387J3KSC0 135 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 KIR3DL2P43630 455 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 RPS23P62266 143 aaKnown RBP17.31■□□□□ 0.36
SHANK1-203ENST00000391813 OR2V1Q8NHB1 315 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 ADIPOR1Q96A54 375 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 GPR27Q9NS67 375 aa17.31■□□□□ 0.36
SHANK1-203ENST00000391813 ZNFX1Q9P2E3 1918 aaKnown RBP17.31■□□□□ 0.36
SHANK1-203ENST00000391813 SIAH2O43255 324 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 NGFP01138 241 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 ZP1P60852 638 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 HFEQ30201 348 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 ZNF260Q3ZCT1 412 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 TEX30Q5JUR7 227 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 LYRM7Q5U5X0 104 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 PRSS3P2Q8NHM4 247 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 CABIN1Q9Y6J0 2220 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 A6NDN8 102 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 DNASE2O00115 360 aaPredicted RBP17.3■□□□□ 0.36
SHANK1-203ENST00000391813 ST8SIA5O15466 376 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 ADAM11O75078 769 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 OR5AL1P0C617 328 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 BRS3P32247 399 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 P2RX4Q99571 388 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 TUBD1Q9UJT1 453 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 CD82P27701 267 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 C16orf82Q7Z2V1 217 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 CES1P1Q9UKY3 287 aa17.3■□□□□ 0.36
SHANK1-203ENST00000391813 C1orf100Q5SVJ3 147 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 VWA1Q6PCB0 445 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 WDR74Q6RFH5 385 aaPredicted RBP17.29■□□□□ 0.36
SHANK1-203ENST00000391813 C11orf42Q8N5U0 333 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 WNT2BQ93097 391 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 A0A1B0GV90 55 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 TNFSF11O14788 317 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 PAGE4O60829 102 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 TRAT1Q6PIZ9 186 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 OR1L6Q8NGR2 347 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 H1FXQ92522 213 aaKnown RBP17.29■□□□□ 0.36
SHANK1-203ENST00000391813 BCL2L2Q92843 193 aaPredicted RBP17.29■□□□□ 0.36
SHANK1-203ENST00000391813 COL11A1P12107 1806 aaPredicted RBP17.29■□□□□ 0.36
SHANK1-203ENST00000391813 ZNF207O43670 478 aaKnown RBP17.29■□□□□ 0.36
SHANK1-203ENST00000391813 CNIH1O95406 144 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 MT-ND6P03923 174 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 NDUFB7P17568 137 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 HTR1DP28221 377 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 SSPNQ14714 243 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 CD226Q15762 336 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 RNF2Q99496 336 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 SLC2A8Q9NY64 477 aa17.29■□□□□ 0.36
SHANK1-203ENST00000391813 TRBV5-7A0A0A0MS05 114 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 SNURFLB1AK76 121 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 H3BMH7 237 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 GALNSP34059 522 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 ACAA2P42765 397 aaKnown RBP17.28■□□□□ 0.36
SHANK1-203ENST00000391813 TMEM252Q8N6L7 170 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 GPX7Q96SL4 187 aaPredicted RBP17.28■□□□□ 0.36
SHANK1-203ENST00000391813 TXNDC17Q9BRA2 123 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 P4HTMQ9NXG6 502 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 RNF24Q9Y225 148 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 HKR1P10072 659 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 PRDX4Q13162 271 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 SFTPA1Q8IWL2 248 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 GAPTQ8N292 157 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 HES4Q9HCC6 221 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 IGHV5-51A0A0C4DH38 117 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 OR5B21A6NL26 309 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 TMEM251Q8N6I4 163 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 CPEB3Q8NE35 698 aaKnown RBP17.28■□□□□ 0.36
SHANK1-203ENST00000391813 PIN1P1O15428 100 aa17.28■□□□□ 0.36
SHANK1-203ENST00000391813 KCNAB3O43448 404 aa17.27■□□□□ 0.36
SHANK1-203ENST00000391813 OR1L3Q8NH93 324 aa17.27■□□□□ 0.36
SHANK1-203ENST00000391813 SGMS2Q8NHU3 365 aa17.27■□□□□ 0.36
SHANK1-203ENST00000391813 SMOC1Q9H4F8 434 aa17.27■□□□□ 0.36
SHANK1-203ENST00000391813 ZNF32P17041 273 aa17.27■□□□□ 0.36
SHANK1-203ENST00000391813 RPS4XP62701 263 aaKnown RBP17.27■□□□□ 0.36
SHANK1-203ENST00000391813 ZNF718Q3SXZ3 478 aa17.27■□□□□ 0.36
SHANK1-203ENST00000391813 ZAR1Q86SH2 424 aa17.27■□□□□ 0.36
SHANK1-203ENST00000391813 PCOLCE2Q9UKZ9 415 aa17.27■□□□□ 0.36
SHANK1-203ENST00000391813 CD74P04233 296 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 RPL13AP40429 203 aaKnown RBP17.27■□□□□ 0.35
SHANK1-203ENST00000391813 OR3A1P47881 315 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 P2RY4P51582 365 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 ROM1Q03395 351 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 TMEM97Q5BJF2 176 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 LRFN3Q9BTN0 628 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 A0A1W2PPV9 198 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 LINC00587B1AMM8 73 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 DANCRP0C864 163 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 C1QL3Q5VWW1 255 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 RHBDD2Q6NTF9 364 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms