RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 RAB5AP20339 215 aa10.35□□□□□ -0.75
DEPDC1-201ENST00000370966 PMELP40967 661 aa10.35□□□□□ -0.75
DEPDC1-201ENST00000370966 FOXC1Q12948 553 aa10.35□□□□□ -0.75
DEPDC1-201ENST00000370966 CLEC12BQ2HXU8 276 aa10.35□□□□□ -0.75
DEPDC1-201ENST00000370966 HFEQ30201 348 aa10.35□□□□□ -0.75
DEPDC1-201ENST00000370966 BHLHA15Q7RTS1 189 aaPredicted RBP10.35□□□□□ -0.75
DEPDC1-201ENST00000370966 UBAC2Q8NBM4 344 aa10.35□□□□□ -0.75
DEPDC1-201ENST00000370966 APOBEC4Q8WW27 367 aaKnown RBP10.35□□□□□ -0.75
DEPDC1-201ENST00000370966 TOLLIPQ9H0E2 274 aa10.35□□□□□ -0.75
DEPDC1-201ENST00000370966 SLC7A10Q9NS82 523 aa10.35□□□□□ -0.75
DEPDC1-201ENST00000370966 ZNF835Q9Y2P0 537 aa10.35□□□□□ -0.75
DEPDC1-201ENST00000370966 TRAV38-1A0A0B4J264 116 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 CRYM-AS1A6NIL9 109 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 NQO2P16083 231 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 ERVFC1-1P60608 527 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 LRFN3Q9BTN0 628 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 ESRP2Q9H6T0 727 aaKnown RBP10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 NPDC1Q9NQX5 325 aaPredicted RBP10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 GPR132Q9UNW8 380 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 HS3ST3B1Q9Y662 390 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 IGHV3-43A0A0B4J1X8 118 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 C3orf80F5H4A9 247 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 NPIPB9F8W1W9 429 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 IGHV3-43DP0DP04 118 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 PRF1P14222 555 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 CTRB1P17538 263 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 SULT1A1P50225 295 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 MRPS11P82912 194 aaKnown RBP10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 TLE1Q04724 770 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 C3AR1Q16581 482 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 CTRB2Q6GPI1 263 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 FAM24BQ8N5W8 94 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 GNB4Q9HAV0 340 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 PARP11Q9NR21 331 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 A0A1W2PN81 502 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 FCGR3AP08637 254 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 HNF1AP20823 631 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 CHRNA7P36544 502 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 GNG10P50151 68 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 TTTY12Q9BZ98 90 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 CTSBP07858 339 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 NTF3P20783 257 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 EWSR1Q01844 656 aaKnown RBP eCLIP10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 GABRA6Q16445 453 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 FAM219AQ8IW50 185 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 SLC25A40Q8TBP6 338 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 RPEQ96AT9 228 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 LOXL4Q96JB6 756 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 HSD17B10Q99714 261 aaKnown RBP10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 Q9N2K0 584 aa10.34□□□□□ -0.75
DEPDC1-201ENST00000370966 FAM90A10PA6NDY2 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A18PA6NE21 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A16PA6NEW6 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A20PA6NIJ5 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A8PA6NJQ4 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A7PA6NKC0 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A22PA8MWA6 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A12PA8MX19 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A5PA8MXJ8 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A23PA8MXZ1 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A15PP0C7V4 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A13PP0C7W8 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A14PP0C7W9 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM90A24PP0C7X0 464 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 F2RP25116 425 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM3AP98173 230 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 HIKESHIQ53FT3 197 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 ZNF66Q6ZN08 573 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 ZNRF4Q8WWF5 429 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 CCL17Q92583 94 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 R3HDM4Q96D70 268 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 GDF15Q99988 308 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 NUDT16L1Q9BRJ7 211 aaKnown RBP10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 LHFPL6Q9Y693 200 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 ZNF236Q9UL36 1845 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 NKX2-6A6NCS4 301 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 THY1P04216 161 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 RPL11P62913 178 aaKnown RBP10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 DDA1Q9BW61 102 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 SLC25A22Q9H936 323 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 RNF122Q9H9V4 155 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 SH2D2AQ9NP31 389 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 IGHMP01871 453 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 GAPDHP04406 335 aaKnown RBP10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 EGR4Q05215 589 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 CEACAM21Q3KPI0 293 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 MOGAT2Q3SYC2 334 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 OR10AD1Q8NGE0 317 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 DTD1Q8TEA8 209 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 RTTNQ86VV8 2226 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 OPN1MWP04001 364 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 OPN1MW2P0DN77 364 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 OPN1MW3P0DN78 364 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FGF12P61328 243 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM210BQ96KR6 192 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 SPSB2Q99619 263 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 SMDT1Q9H4I9 107 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 FAM206AQ9NX38 181 aa10.33□□□□□ -0.76
DEPDC1-201ENST00000370966 MEX3AA1L020 520 aaKnown RBP10.32□□□□□ -0.76
DEPDC1-201ENST00000370966 TMEM229AB2RXF0 380 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms