RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 RAB5AP20339 215 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 PMELP40967 661 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 RBM11P57052 281 aaKnown RBP4.24□□□□□ -1.73
SCN3A-202ENST00000360093 MIDNQ504T8 468 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 VAX1Q5SQQ9 334 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 FAM219BQ5XKK7 198 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 FLYWCH2Q96CP2 140 aaKnown RBP4.24□□□□□ -1.73
SCN3A-202ENST00000360093 R3HDM4Q96D70 268 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 LINC00470Q9BZP3 86 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 PKIBQ9C010 78 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 LNP1A1A4G5 178 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 NUPL2O15504 423 aaKnown RBP4.24□□□□□ -1.73
SCN3A-202ENST00000360093 SOCS1O15524 211 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 MC5RP33032 325 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 RTP5Q14D33 572 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 C3AR1Q16581 482 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 OR5R1Q8NH85 324 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 C14orf79Q96F83 325 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 OR2J1Q9GZK6 312 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 UBTD1Q9HAC8 227 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 TINAGQ9UJW2 476 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 GAB2Q9UQC2 676 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 ZNF835Q9Y2P0 537 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 BOLA1Q9Y3E2 137 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 MS4A18H0YCH9 400 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 F2RL2O00254 374 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 UPK3AO75631 287 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 CST7O76096 145 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 RBP4P02753 201 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 MNX1P50219 401 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-202ENST00000360093 OR5I1Q13606 314 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 MS4A18Q3C1V0 323 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 STXBP6Q8NFX7 210 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 OR1K1Q8NGR3 316 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 SLC25A10Q9UBX3 287 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-202ENST00000360093 IL19Q9UHD0 177 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 TTRP02766 147 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 COMPP49747 757 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-202ENST00000360093 CLEC2AQ6UVW9 174 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 LRRTM1Q86UE6 522 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 TGIF2LYQ8IUE0 185 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 TGIF2LXQ8IUE1 241 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM104Q8NE00 496 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 RPUSD4Q96CM3 377 aaKnown RBP4.24□□□□□ -1.73
SCN3A-202ENST00000360093 ATP5SQ99766 215 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 Q9N2K0 584 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM74BQ9NUR3 256 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 SYNGR2O43760 224 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 MMP9P14780 707 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 FUT5Q11128 374 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 KLRB1Q12918 225 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 GCSAMQ8N6F7 178 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 CTDSP1Q9GZU7 261 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 HSF4Q9ULV5 492 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 V9GYH0 126 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 AHCTF1Q8WYP5 2266 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 LOC390937A0A1W2PQ73 354 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 DEFB108AA8MXU0 73 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 MGST3O14880 152 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 NKX2-8O15522 239 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 PRDX2P32119 198 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 FDX2Q6P4F2 183 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 SEZ6L2Q6UXD5 910 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 DPPA3Q6W0C5 159 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 ZNF66Q6ZN08 573 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 SYNGR1O43759 233 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 C11orf91Q3C1V1 193 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 RXFP4Q8TDU9 374 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM45BQ96B21 275 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 GPA33Q99795 319 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 TMPRSS13Q9BYE2 586 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 SLC2A9Q9NRM0 540 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 TRBV5-5A0A0J9YX44 114 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 ATP6V1G2-DDX39BF2Z307 99 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 H3BP45 60 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 AGFG2O95081 481 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 VSIG8P0DPA2 414 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 MGAT2Q10469 447 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 DMRTC1Q5HYR2 192 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 C10orf128Q5T292 105 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 C1QTNF12Q5T7M4 302 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM91Q6ZNR0 172 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 GLCCI1Q86VQ1 547 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 SFTPA2Q8IWL1 248 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 C1orf162Q8NEQ5 155 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-202ENST00000360093 ADAT3Q96EY9 351 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-202ENST00000360093 PARP12Q9H0J9 701 aaKnown RBP4.24□□□□□ -1.73
SCN3A-202ENST00000360093 WIPI2Q9Y4P8 454 aa4.24□□□□□ -1.73
SCN3A-202ENST00000360093 KIF26BQ2KJY2 2108 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 FAM186AA6NE01 2351 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 RNASEK-C17orf49H0YIS7 233 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 K7N7A8 449 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 SEMA7AO75326 666 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 COX6B1P14854 86 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM11P17152 192 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 COX7A1P24310 79 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 ERVFC1-1P60608 527 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 RPL31P62899 125 aaKnown RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 RAB32Q13637 225 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM123Q8N131 208 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms