RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 IGKV1D-42A0A075B6H8 117 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 NKX2-6A6NCS4 301 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 HAND1O96004 215 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 PGA4P0DJD7 388 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 RBM11P57052 281 aaKnown RBP14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 BSXQ3C1V8 233 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 INO80CQ6PI98 192 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 SLC25A47Q6Q0C1 308 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 KLHDC1Q8N7A1 406 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 NPDC1Q9NQX5 325 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 C3orf80F5H4A9 247 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 PLAC9Q5JTB6 97 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 OR10D4PQ8NGN7 298 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 VSTM2AQ8TAG5 236 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 GPR132Q9UNW8 380 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 PLXNA1Q9UIW2 1896 aa14.93□□□□□ -0.02
TRAPPC11-201ENST00000334690 C7orf77A4D0Y5 90 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 CDRT15L2A8MXV6 281 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 TDRD6O60522 2096 aaKnown RBP14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 MRPS11P82912 194 aaKnown RBP14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 SH2D2AQ9NP31 389 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 TIMM9Q9Y5J7 89 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 NPIPB13A6NJU9 1138 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 NPIPB4C9JG80 1138 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 IL11P20809 199 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 FOXL2P58012 376 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 C19orf48Q6RUI8 117 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 OR2T6Q8NHC8 308 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 DTD1Q8TEA8 209 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 CHRNA10Q9GZZ6 450 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 PATE3B3GLJ2 98 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 B4DEV8 164 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 ZNF205O95201 554 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 GAPDHP04406 335 aaKnown RBP14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 FCGR3AP08637 254 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 RANP62826 216 aaKnown RBP14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 PAX5Q02548 391 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 SLC25A45Q8N413 288 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 R3HDM4Q96D70 268 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 CDX2Q99626 313 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 MANBALQ9NQG1 85 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 CLCF1Q9UBD9 225 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 A0A1W2PN81 502 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 CHRNA7P36544 502 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 OPRK1P41145 380 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 TUSC1Q2TAM9 212 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 Q9N2K0 584 aa14.92□□□□□ -0.02
TRAPPC11-201ENST00000334690 A0A1W2PNV4 684 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 FABP4P15090 132 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 LHFPL5Q8TAF8 219 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 ZNF519Q8TB69 540 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 SMDT1Q9H4I9 107 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 NAT8Q9UHE5 227 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 BRCA1P38398 1863 aaKnown RBP14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 FGF5P12034 268 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 F2RP25116 425 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 CBLN2Q8IUK8 224 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 MS4A18H0YCH9 400 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 ZNF154Q13106 437 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 C3AR1Q16581 482 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 HFEQ30201 348 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 MS4A18Q3C1V0 323 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 LYPD8Q6UX82 237 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 RPEQ96AT9 228 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 HDHD3Q9BSH5 251 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 FAM103A1Q9BTL3 118 aaKnown RBP14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 VAX2Q9UIW0 290 aa14.91□□□□□ -0.02
TRAPPC11-201ENST00000334690 AP4M1O00189 453 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 RD3LP0DJH9 198 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 SUMO1P63165 101 aaKnown RBP14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 PSG4Q00888 419 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 MRGPRFQ96AM1 343 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 BARX1Q9HBU1 254 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 TMEM210A6NLX4 147 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 IQCJQ1A5X6 159 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 FAM219AQ8IW50 185 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 OR10AD1Q8NGE0 317 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 CCL17Q92583 94 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 HSD17B10Q99714 261 aaKnown RBP14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 A0A1W2PP11 408 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 IGKV3-11P04433 115 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 GNG4P50150 75 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 FGF8P55075 233 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 RIPPLY2Q5TAB7 128 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 MOB3AQ96BX8 217 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 TRAV38-1A0A0B4J264 116 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 SP1P08047 785 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 PRF1P14222 555 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 GMPPAQ96IJ6 420 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 RNF122Q9H9V4 155 aa14.9□□□□□ -0.02
TRAPPC11-201ENST00000334690 SEC14L6B5MCN3 397 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 ARG1P05089 322 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 HIKESHIQ53FT3 197 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 MRGPRGQ86SM5 289 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 DNASE2BQ8WZ79 361 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 NAT8BQ9UHF3 227 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 FOSL1P15407 271 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 CD82P27701 267 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 KRTDAPP60985 99 aa14.89□□□□□ -0.03
TRAPPC11-201ENST00000334690 ZNF660Q6AZW8 331 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms