RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 SVILO95425 2214 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 IGKV1-6A0A0C4DH72 117 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 WRBO00258 174 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 IGHV2-5P01817 119 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 TMEM42Q69YG0 159 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 DOCK10Q96BY6 2186 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 TGIF2-C20orf24A0A0A6YYL0 155 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 C5orf49A4QMS7 147 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 SYNGR1O43759 233 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 FKBP2P26885 142 aaKnown RBP17.03■□□□□ 0.32
CRLF3-201ENST00000324238 MLF1P58340 268 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 UBE2KP61086 200 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 ZNF674Q2M3X9 581 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 ZNF251Q9BRH9 671 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 PRRG4Q9BZD6 226 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 MED13Q9UHV7 2174 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 ZNF816-ZNF321PA0A0X1KG74 233 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 ZNF503-AS2A6NEH8 195 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 ARGFXA6NJG6 315 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 SLC22A20A6NK97 555 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 LILRA1O75019 489 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 SMIM6P0DI80 62 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 EXT1Q16394 746 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 GFI1BQ5VTD9 330 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 ASCL4Q6XD76 172 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 CPNE4Q96A23 557 aaPredicted RBP17.03■□□□□ 0.32
CRLF3-201ENST00000324238 TAAR9Q96RI9 348 aa17.03■□□□□ 0.32
CRLF3-201ENST00000324238 STRAPQ9Y3F4 350 aaKnown RBP17.03■□□□□ 0.32
CRLF3-201ENST00000324238 LOC102723996A0A087X1L8 192 aa17.02■□□□□ 0.32
CRLF3-201ENST00000324238 AP4M1O00189 453 aa17.02■□□□□ 0.32
CRLF3-201ENST00000324238 TK1P04183 234 aa17.02■□□□□ 0.32
CRLF3-201ENST00000324238 FGF8P55075 233 aaPredicted RBP17.02■□□□□ 0.32
CRLF3-201ENST00000324238 C3AR1Q16581 482 aa17.02■□□□□ 0.32
CRLF3-201ENST00000324238 METTL1Q9UBP6 276 aaKnown RBP17.02■□□□□ 0.32
CRLF3-201ENST00000324238 DLK1P80370 383 aa17.02■□□□□ 0.31
CRLF3-201ENST00000324238 C4orf17Q53FE4 359 aa17.02■□□□□ 0.31
CRLF3-201ENST00000324238 C9orf152Q5JTZ5 239 aa17.02■□□□□ 0.31
CRLF3-201ENST00000324238 THNSL2Q86YJ6 484 aa17.02■□□□□ 0.31
CRLF3-201ENST00000324238 ZNF100Q8IYN0 542 aa17.02■□□□□ 0.31
CRLF3-201ENST00000324238 WDR54Q9H977 334 aa17.02■□□□□ 0.31
CRLF3-201ENST00000324238 SEBOXQ9HB31 216 aaPredicted RBP17.02■□□□□ 0.31
CRLF3-201ENST00000324238 MTCH1Q9NZJ7 389 aa17.02■□□□□ 0.31
CRLF3-201ENST00000324238 DOCK11Q5JSL3 2073 aa17.02■□□□□ 0.31
CRLF3-201ENST00000324238 ERVFRD-1P60508 538 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 CPT1CQ8TCG5 803 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 Q8WTZ3 238 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 RSG1Q9BU20 258 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 CALHM2Q9HA72 323 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 PLA2G3Q9NZ20 509 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 GTF3C1Q12789 2109 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 FAM166BA8MTA8 275 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 S100A8P05109 93 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 LMO1P25800 156 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 ARF1P84077 181 aaKnown RBP17.01■□□□□ 0.31
CRLF3-201ENST00000324238 PRDX4Q13162 271 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 SLC25A24Q6NUK1 477 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 ZNF429Q86V71 674 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 CDX2Q99626 313 aaPredicted RBP17.01■□□□□ 0.31
CRLF3-201ENST00000324238 VSIRQ9H7M9 311 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 PLEKHF2Q9H8W4 249 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 IFITM10A6NMD0 228 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 ZNF732B4DXR9 585 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 IAPPP10997 89 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 EIF3IQ13347 325 aaKnown RBP17.01■□□□□ 0.31
CRLF3-201ENST00000324238 MPV17LQ2QL34 196 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 TIPARPQ7Z3E1 657 aaKnown RBP17.01■□□□□ 0.31
CRLF3-201ENST00000324238 COMMD1Q8N668 190 aa17.01■□□□□ 0.31
CRLF3-201ENST00000324238 INTS12Q96CB8 462 aaKnown RBP17.01■□□□□ 0.31
CRLF3-201ENST00000324238 A0A1W2PR80 420 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 ZFP92A6NM28 416 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 ZNF16P17020 682 aaPredicted RBP17■□□□□ 0.31
CRLF3-201ENST00000324238 EIF2S3P41091 472 aaKnown RBP17■□□□□ 0.31
CRLF3-201ENST00000324238 RHEBQ15382 184 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 TMEM211Q6ICI0 200 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 LCN15Q6UWW0 184 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 IL22RA1Q8N6P7 574 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 ZNF552Q9H707 407 aaPredicted RBP17■□□□□ 0.31
CRLF3-201ENST00000324238 SH2D2AQ9NP31 389 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 GNG13Q9P2W3 67 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 SRP19P09132 144 aaKnown RBP17■□□□□ 0.31
CRLF3-201ENST00000324238 PAX6P26367 422 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 HEPN1Q6WQI6 88 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 SPNS3Q6ZMD2 512 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 TCTEX1D2Q8WW35 142 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 MUCL1Q96DR8 90 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 SIGLEC12Q96PQ1 595 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 C11orf1Q9H5F2 150 aa17■□□□□ 0.31
CRLF3-201ENST00000324238 LYRM2Q9NU23 88 aaPredicted RBP17■□□□□ 0.31
CRLF3-201ENST00000324238 CNOT1A5YKK6 2376 aaKnown RBP17■□□□□ 0.31
CRLF3-201ENST00000324238 TTC28Q96AY4 2481 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 RPL36A-HNRNPH2H7BZ11 118 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 RAB5CP51148 216 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 S100A12P80511 92 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 ZNF266Q14584 549 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 ICAM4Q14773 271 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 LINC00696Q6ZRV3 163 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 CMTM1Q8IZ96 169 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 RNASE11Q8TAA1 199 aaKnown RBP16.99■□□□□ 0.31
CRLF3-201ENST00000324238 LRRC3CA6NJW4 275 aa16.99■□□□□ 0.31
CRLF3-201ENST00000324238 RPL23AP62750 156 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms