RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 ZNF841Q6ZN19 808 aa18.62■□□□□ 0.57
CCDC85B-201ENST00000312579 TRAPPC6BQ86SZ2 158 aa18.62■□□□□ 0.57
CCDC85B-201ENST00000312579 NEDD4LQ96PU5 975 aa18.62■□□□□ 0.57
CCDC85B-201ENST00000312579 SULT4A1Q9BR01 284 aa18.62■□□□□ 0.57
CCDC85B-201ENST00000312579 FAAP24Q9BTP7 215 aa18.62■□□□□ 0.57
CCDC85B-201ENST00000312579 PECRQ9BY49 303 aa18.62■□□□□ 0.57
CCDC85B-201ENST00000312579 DNTTIP1Q9H147 329 aa18.62■□□□□ 0.57
CCDC85B-201ENST00000312579 IFT22Q9H7X7 185 aa18.62■□□□□ 0.57
CCDC85B-201ENST00000312579 SEBOXQ9HB31 216 aaPredicted RBP18.62■□□□□ 0.57
CCDC85B-201ENST00000312579 F5H0A9 414 aaPredicted RBP18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 K7N7A8 449 aa18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 TK1P04183 234 aa18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 ATXN7L3Q14CW9 347 aaPredicted RBP18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 CCBE1Q6UXH8 406 aaPredicted RBP18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 OR8B3Q8NGG8 313 aa18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 NUDCD2Q8WVJ2 157 aa18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 NEIL1Q96FI4 390 aaPredicted RBP18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 POM121Q96HA1 1249 aa18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 MED30Q96HR3 178 aa18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 OR8B2Q96RD0 313 aa18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 REG4Q9BYZ8 158 aa18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCDC85B-201ENST00000312579 FAM240BA0A1B0GVZ2 78 aa18.6■□□□□ 0.57
CCDC85B-201ENST00000312579 PHF1O43189 567 aaPredicted RBP18.6■□□□□ 0.57
CCDC85B-201ENST00000312579 USF1P22415 310 aaPredicted RBP18.6■□□□□ 0.57
CCDC85B-201ENST00000312579 GRK1Q15835 563 aa18.6■□□□□ 0.57
CCDC85B-201ENST00000312579 PLPPR1Q8TBJ4 325 aa18.6■□□□□ 0.57
CCDC85B-201ENST00000312579 NEK7Q8TDX7 302 aa18.6■□□□□ 0.57
CCDC85B-201ENST00000312579 ST8SIA4Q92187 359 aa18.6■□□□□ 0.57
CCDC85B-201ENST00000312579 SNX22Q96L94 193 aa18.6■□□□□ 0.57
CCDC85B-201ENST00000312579 PLEKHJ1Q9NW61 149 aa18.6■□□□□ 0.57
CCDC85B-201ENST00000312579 SLC25A10Q9UBX3 287 aaPredicted RBP18.6■□□□□ 0.57
CCDC85B-201ENST00000312579 KCNK7Q9Y2U2 307 aa18.6■□□□□ 0.57
CCDC85B-201ENST00000312579 MEX3AA1L020 520 aaKnown RBP18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 NDUFB3O43676 98 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 NDUFB7P17568 137 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 ARFRP1Q13795 201 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 EDDM3AQ14507 147 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 TPRX1Q8N7U7 411 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 MED13LQ71F56 2210 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 SERPINE3A8MV23 424 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 FAM157AC9JC47 383 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 MCRIP1C9JLW8 97 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 MT-ND4P03905 459 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 RCVRNP35243 200 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 AESQ08117 197 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 NLRC3Q7RTR2 1065 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 HRASLSQ9HDD0 168 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 IFT46Q9NQC8 304 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 HSF4Q9ULV5 492 aa18.59■□□□□ 0.57
CCDC85B-201ENST00000312579 MYO9AB2RTY4 2548 aa18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 NAP1L6A6NFF2 107 aa18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 FAUP35544 74 aaKnown RBP18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 LRRC10Q5BKY1 277 aa18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 WDR25Q64LD2 544 aaPredicted RBP18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 CIARTQ8N365 385 aaPredicted RBP18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 DEDD2Q8WXF8 326 aa18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 COQ2Q96H96 371 aa18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 HDHD3Q9BSH5 251 aaPredicted RBP18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 SPACA1Q9HBV2 294 aa18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 CLN8Q9UBY8 286 aa18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 AK3Q9UIJ7 227 aa18.58■□□□□ 0.56
CCDC85B-201ENST00000312579 MALRD1Q5VYJ5 2156 aa18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 SSX5O60225 188 aa18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 CA11O75493 328 aa18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 FCER2P06734 321 aa18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 ZFP36P26651 326 aaKnown RBP18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 TAS2R19P59542 299 aa18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 GNB2P62879 340 aa18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 TMEM229BQ8NBD8 167 aa18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 H1FXQ92522 213 aaKnown RBP18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 FAM234AQ9H0X4 552 aa18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 LPAR2Q9HBW0 351 aa18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 ZNF107Q9UII5 783 aaPredicted RBP18.57■□□□□ 0.56
CCDC85B-201ENST00000312579 ITPR3Q14573 2671 aa18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 ARHGAP32A7KAX9 2087 aa18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 TRAV39A0A0B4J263 110 aa18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 BTCP35070 178 aa18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 CBX5P45973 191 aa18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 GLIPR1P48060 266 aa18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 EDDM3BP56851 147 aa18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 RAB39BQ96DA2 213 aa18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 DCTN5Q9BTE1 182 aa18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 SSBP3Q9BWW4 388 aaPredicted RBP18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 DPAGT1Q9H3H5 408 aa18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 ETAA1Q9NY74 926 aa18.56■□□□□ 0.56
CCDC85B-201ENST00000312579 KIAA1324LA8MWY0 1029 aaPredicted RBP18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 H3BUI4 141 aa18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 MGST3O14880 152 aa18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 AKAIN1P0CW23 69 aa18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 SLC6A1P30531 599 aa18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 LCN2P80188 198 aa18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 ESCO2Q56NI9 601 aa18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 RSBN1Q5VWQ0 802 aaPredicted RBP18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 PLET1Q6UQ28 207 aa18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 DUSP18Q8NEJ0 188 aa18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 PPP1R35Q8TAP8 253 aa18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 MMP28Q9H239 520 aa18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 ABCA2Q9BZC7 2435 aa18.55■□□□□ 0.56
CCDC85B-201ENST00000312579 MRPS15P82914 257 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms