RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 SCNM1Q9BWG6 230 aa21.43■■□□□ 1.02
ROM1-201ENST00000278833 CACFD1Q9UGQ2 172 aa21.43■■□□□ 1.02
ROM1-201ENST00000278833 ARHGAP21Q5T5U3 1957 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 SHANK1Q9Y566 2161 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 AKAP13Q12802 2813 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 SLC22A20A6NK97 555 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 FAM166BA8MTA8 275 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 PITX3O75364 302 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 CD80P33681 288 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 RFC3P40938 356 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 EWSR1Q01844 656 aaKnown RBP eCLIP21.42■■□□□ 1.02
ROM1-201ENST00000278833 FAM76BQ5HYJ3 339 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 ZNF573Q86YE8 665 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 OR8G5Q8NG78 346 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 SNIP1Q8TAD8 396 aaKnown RBP21.42■■□□□ 1.02
ROM1-201ENST00000278833 HIST1H2AAQ96QV6 131 aa21.42■■□□□ 1.02
ROM1-201ENST00000278833 NMSQ5H8A3 153 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 OR2C3Q8N628 320 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 CABLES2Q9BTV7 478 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 LHX6Q9UPM6 363 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 NKX2-6A6NCS4 301 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 NPIPB11E5RHQ5 1161 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 H0Y980 276 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 TSPAN15O95858 294 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 SP1P08047 785 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 ITGA3P26006 1051 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 NKX2-1P43699 371 aaPredicted RBP21.41■■□□□ 1.02
ROM1-201ENST00000278833 ZNF266Q14584 549 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 LFNGQ8NES3 379 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 OR5D13Q8NGL4 314 aa21.41■■□□□ 1.02
ROM1-201ENST00000278833 MRPL30Q8TCC3 161 aaKnown RBP21.41■■□□□ 1.02
ROM1-201ENST00000278833 UBE2J1Q9Y385 318 aaPredicted RBP21.41■■□□□ 1.02
ROM1-201ENST00000278833 CELSR3Q9NYQ7 3312 aa21.4■■□□□ 1.02
ROM1-201ENST00000278833 CCNOP22674 350 aa21.4■■□□□ 1.02
ROM1-201ENST00000278833 GNG3P63215 75 aa21.4■■□□□ 1.02
ROM1-201ENST00000278833 PLGLB1Q02325 96 aa21.4■■□□□ 1.02
ROM1-201ENST00000278833 PEA15Q15121 130 aa21.4■■□□□ 1.02
ROM1-201ENST00000278833 MEX3BQ6ZN04 569 aaKnown RBP21.4■■□□□ 1.02
ROM1-201ENST00000278833 ZNF818PQ6ZRF7 136 aa21.4■■□□□ 1.02
ROM1-201ENST00000278833 ZNF695Q8IW36 515 aa21.4■■□□□ 1.02
ROM1-201ENST00000278833 NANOS1Q8WY41 292 aaKnown RBP21.4■■□□□ 1.02
ROM1-201ENST00000278833 ZNF552Q9H707 407 aaPredicted RBP21.4■■□□□ 1.02
ROM1-201ENST00000278833 C19orf12Q9NSK7 152 aa21.4■■□□□ 1.02
ROM1-201ENST00000278833 ANKRD30BLA7E2S9 258 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 C9JQL5 133 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 K7N7A8 449 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 SCTP09683 121 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 VDAC1P21796 283 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 MEOX1P50221 254 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 MIDNQ504T8 468 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 C9orf135Q5VTT2 229 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 ZFP62Q8NB50 900 aaPredicted RBP21.39■■□□□ 1.02
ROM1-201ENST00000278833 OR1K1Q8NGR3 316 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 WNT2BQ93097 391 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 HS3ST6Q96QI5 342 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 SLC25A31Q9H0C2 315 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 SMDT1Q9H4I9 107 aa21.39■■□□□ 1.02
ROM1-201ENST00000278833 LYRM2Q9NU23 88 aaPredicted RBP21.39■■□□□ 1.02
ROM1-201ENST00000278833 IGKV1-6A0A0C4DH72 117 aa21.39■■□□□ 1.01
ROM1-201ENST00000278833 KLRC4-KLRK1H3BQV0 150 aa21.39■■□□□ 1.01
ROM1-201ENST00000278833 F12P00748 615 aaPredicted RBP21.39■■□□□ 1.01
ROM1-201ENST00000278833 NGFP01138 241 aa21.39■■□□□ 1.01
ROM1-201ENST00000278833 FOLR2P14207 255 aa21.39■■□□□ 1.01
ROM1-201ENST00000278833 APLNRP35414 380 aa21.39■■□□□ 1.01
ROM1-201ENST00000278833 NUFIP2Q7Z417 695 aaKnown RBP21.39■■□□□ 1.01
ROM1-201ENST00000278833 GAPTQ8N292 157 aa21.39■■□□□ 1.01
ROM1-201ENST00000278833 LILRB1Q8NHL6 650 aaPredicted RBP21.39■■□□□ 1.01
ROM1-201ENST00000278833 FER1L6-AS2Q96M78 137 aa21.39■■□□□ 1.01
ROM1-201ENST00000278833 PLEKHF2Q9H8W4 249 aa21.39■■□□□ 1.01
ROM1-201ENST00000278833 MED19A0JLT2 244 aaPredicted RBP21.38■■□□□ 1.01
ROM1-201ENST00000278833 SLC25A6P12236 298 aa21.38■■□□□ 1.01
ROM1-201ENST00000278833 CCL2P13500 99 aa21.38■■□□□ 1.01
ROM1-201ENST00000278833 WNT5AP41221 380 aa21.38■■□□□ 1.01
ROM1-201ENST00000278833 CAMLGP49069 296 aa21.38■■□□□ 1.01
ROM1-201ENST00000278833 BAXQ07812 192 aa21.38■■□□□ 1.01
ROM1-201ENST00000278833 PCSK4Q6UW60 755 aa21.38■■□□□ 1.01
ROM1-201ENST00000278833 MCEMP1Q8IX19 187 aa21.38■■□□□ 1.01
ROM1-201ENST00000278833 SUMF2Q8NBJ7 301 aa21.38■■□□□ 1.01
ROM1-201ENST00000278833 SECTM1Q8WVN6 248 aa21.38■■□□□ 1.01
ROM1-201ENST00000278833 BCL2L2Q92843 193 aaPredicted RBP21.38■■□□□ 1.01
ROM1-201ENST00000278833 FRYQ5TBA9 3013 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 IGKV1D-13A0A0B4J2D9 117 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 SYNGR1O43759 233 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 IGKV1-13P0DP09 117 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 HLA-DRB3P79483 266 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 ID3Q02535 119 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 NHLH2Q02577 135 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 TREM2Q9NZC2 230 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 LRP5LA4QPB2 252 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 UMAD1C9J7I0 102 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 CLN3Q13286 438 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 GUK1Q16774 197 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 SHEQ5VZ18 495 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 MOB1BQ7L9L4 216 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 CMTM1Q8IZ96 169 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 EGLN1Q9GZT9 426 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 SMCO4Q9NRQ5 59 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 IL36RNQ9UBH0 155 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 MLXQ9UH92 298 aa21.37■■□□□ 1.01
ROM1-201ENST00000278833 FREM1Q5H8C1 2179 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms