RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 BAXQ07812 192 aa13.83□□□□□ -0.19
PRPF40B-201ENST00000261897 GAB4Q2WGN9 574 aa13.83□□□□□ -0.19
PRPF40B-201ENST00000261897 LHFPL1Q86WI0 220 aa13.83□□□□□ -0.19
PRPF40B-201ENST00000261897 MYOTQ9UBF9 498 aa13.83□□□□□ -0.19
PRPF40B-201ENST00000261897 KIR2DS5A0A0G2JLQ3 304 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 A0A0G2JNG1 304 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 KIR2DS3K7RE56 304 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 HSPB1P04792 205 aaKnown RBP13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 PSMB3P49720 205 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 KIR2DS5Q14953 304 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 OR2T10Q8NGZ9 312 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 GPBAR1Q8TDU6 330 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 MRGPRX1Q96LB2 322 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 KCNK17Q96T54 332 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 ZDHHC11Q9H8X9 412 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 E9PLN8 166 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 MPZP25189 248 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 ZNF133P52736 654 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 SLC35E3Q7Z769 313 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 ZNF100Q8IYN0 542 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 CCNL2Q96S94 520 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 TMEM208Q9BTX3 173 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 RYDENQ9NUL5 291 aaKnown RBP13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 SEMA5BQ9P283 1151 aa13.83□□□□□ -0.2
PRPF40B-201ENST00000261897 CA3P07451 260 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 PMELP40967 661 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 ENDOGQ14249 297 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 THEM4Q5T1C6 240 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 SPSB3Q6PJ21 355 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 SSX7Q7RTT5 188 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 CLDND2Q8NHS1 167 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 RAB24Q969Q5 203 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 Q9N2K0 584 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 TUSC2O75896 110 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 OTX2P32243 289 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 PTTG1IPP53801 180 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 GNB2P62879 340 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 C17orf67Q0P5P2 114 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 SPTSSAQ969W0 71 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 CACNG5Q9UF02 275 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 SELENOKQ9Y6D0 94 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 LAMA1P25391 3075 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 TNFRSF10CO14798 259 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 GALR2O43603 387 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 TM4SF4P48230 202 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 TMEM256Q8N2U0 113 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 VAMP8Q9BV40 100 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 PSENENQ9NZ42 101 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 TUBD1Q9UJT1 453 aa13.82□□□□□ -0.2
PRPF40B-201ENST00000261897 PGPEP1LA6NFU8 196 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 PMCHP20382 165 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 SLC35B1P78383 322 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 TCF23Q7RTU1 214 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 NOXO1Q8NFA2 376 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 ALKBH3Q96Q83 286 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 TMEM106CQ9BVX2 250 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 CACNA1GO43497 2377 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 KCNIP4Q6PIL6 250 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 ATOH7Q8N100 152 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 GATAD1Q8WUU5 269 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 FOXJ2Q9P0K8 574 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 NAGKQ9UJ70 344 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 RNF150Q9ULK6 438 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 THBS3P49746 956 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 TNFSF10P50591 281 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 TRA2AQ13595 282 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 ALKBH2Q6NS38 261 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 GJC3Q8NFK1 279 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 BADQ92934 168 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 IMMP2LQ96T52 175 aa13.81□□□□□ -0.2
PRPF40B-201ENST00000261897 CELSR3Q9NYQ7 3312 aa13.8□□□□□ -0.2
PRPF40B-201ENST00000261897 PROB1E7EW31 1015 aa13.8□□□□□ -0.2
PRPF40B-201ENST00000261897 DHRS3O75911 302 aa13.8□□□□□ -0.2
PRPF40B-201ENST00000261897 CCL2P13500 99 aa13.8□□□□□ -0.2
PRPF40B-201ENST00000261897 B4GALT1P15291 398 aa13.8□□□□□ -0.2
PRPF40B-201ENST00000261897 ECI1P42126 302 aa13.8□□□□□ -0.2
PRPF40B-201ENST00000261897 SNAI3Q3KNW1 292 aa13.8□□□□□ -0.2
PRPF40B-201ENST00000261897 OSR2Q8N2R0 312 aa13.8□□□□□ -0.2
PRPF40B-201ENST00000261897 NRASP01111 189 aa13.8□□□□□ -0.2
PRPF40B-201ENST00000261897 SCTP09683 121 aa13.8□□□□□ -0.2
PRPF40B-201ENST00000261897 PLPPR2Q96GM1 343 aa13.8□□□□□ -0.2
PRPF40B-201ENST00000261897 SIRPB1O00241 398 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 PAGE4O60829 102 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 LYL1P12980 280 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 IRF2P14316 349 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 OR1D5P58170 312 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 ZNF774Q6NX45 483 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 WDR5BQ86VZ2 330 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 VPS25Q9BRG1 176 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 PIAS3Q9Y6X2 628 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 HPRT1P00492 218 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 TCN2P20062 427 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 OR10G3Q8NGC4 313 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 MRPL30Q8TCC3 161 aaKnown RBP13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 LIPHQ8WWY8 451 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 HSPB9Q9BQS6 159 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 TBX21Q9UL17 535 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 MSR1P21757 451 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 IL15RAQ13261 267 aa13.79□□□□□ -0.2
PRPF40B-201ENST00000261897 EXTL1Q92935 676 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms