RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 DTD1Q8TEA8 209 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 HARBI1Q96MB7 349 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 TMEM127O75204 238 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 BMI1P35226 326 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 PDPNQ86YL7 162 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 SLC35B3Q9H1N7 401 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 SEC16AO15027 2179 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 ACAA2P42765 397 aaKnown RBP16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 V9GYH0 126 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 TMSB15BA0A087X1C1 80 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 COL10A1Q03692 680 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 C16orf97H3BN30 126 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 PMS2P11Q13670 270 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 RPEL1Q2QD12 228 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 GRAMD2BQ96HH9 432 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 COL4A1P02462 1669 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 CTSDP07339 412 aaPredicted RBP16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 VSIG8P0DPA2 414 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 FBXW9Q5XUX1 488 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 ZNF441Q8N8Z8 693 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 OR4D10Q8NGI6 311 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 ASB13Q8WXK3 278 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 TOLLIPQ9H0E2 274 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 ZNF665Q9H7R5 613 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 GLRX2Q9NS18 164 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 YTHDF2Q9Y5A9 579 aaKnown RBP16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 ZP3P21754 424 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 C19orf57Q0VDD7 668 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 MOGAT2Q3SYC2 334 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 ZNF501Q96CX3 271 aaPredicted RBP16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 MARVELD1Q9BSK0 173 aa16.34■□□□□ 0.21
SMARCC1-201ENST00000254480 HILPDAQ9Y5L2 63 aa16.33■□□□□ 0.21
SMARCC1-201ENST00000254480 TGOLN2O43493 480 aa16.33■□□□□ 0.21
SMARCC1-201ENST00000254480 C21orf58P58505 322 aa16.33■□□□□ 0.21
SMARCC1-201ENST00000254480 STPG1Q5TH74 334 aa16.33■□□□□ 0.21
SMARCC1-201ENST00000254480 LILRB1Q8NHL6 650 aaPredicted RBP16.33■□□□□ 0.2
SMARCC1-201ENST00000254480 SLC2A9Q9NRM0 540 aa16.33■□□□□ 0.2
SMARCC1-201ENST00000254480 RABAC1Q9UI14 185 aa16.33■□□□□ 0.2
SMARCC1-201ENST00000254480 CEP290O15078 2479 aa16.33■□□□□ 0.2
SMARCC1-201ENST00000254480 CRXO43186 299 aaPredicted RBP16.33■□□□□ 0.2
SMARCC1-201ENST00000254480 S100A8P05109 93 aa16.33■□□□□ 0.2
SMARCC1-201ENST00000254480 TCTAP57738 103 aa16.33■□□□□ 0.2
SMARCC1-201ENST00000254480 NANOS3P60323 173 aaKnown RBP16.33■□□□□ 0.2
SMARCC1-201ENST00000254480 CLN8Q9UBY8 286 aa16.33■□□□□ 0.2
SMARCC1-201ENST00000254480 CES1P1Q9UKY3 287 aa16.33■□□□□ 0.2
SMARCC1-201ENST00000254480 ZNF880Q6PDB4 577 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 SLC26A10Q8NG04 563 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 SOSTQ9BQB4 213 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 ORM1P02763 201 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 PMS2CLQ68D20 193 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 CLDN34H7C241 214 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 ANGPTL6Q8NI99 470 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 ZNF596Q8TC21 504 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 RPS4Y2Q8TD47 263 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 CCL13Q99616 98 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 BRS3P32247 399 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 FAM222BQ8WU58 562 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 SIRT4Q9Y6E7 314 aaPredicted RBP16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 DNPH1O43598 174 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 RPS4Y1P22090 263 aaKnown RBP16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 CEBPDP49716 269 aaPredicted RBP16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 PLPPR5Q32ZL2 321 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 C5orf17Q8NAS9 161 aa16.32■□□□□ 0.2
SMARCC1-201ENST00000254480 C11orf91Q3C1V1 193 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 SLC7A10Q9NS82 523 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 TMEM140Q9NV12 185 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 TRBV5-3A0A0A0MS03 114 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 A0A1W2PP11 408 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 RBFOX3A6NFN3 312 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 ADRA2AP08913 450 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 MMDQ15546 238 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 FAM162BQ5T6X4 162 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 RCC2Q9P258 522 aaKnown RBP16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 VSIG4Q9Y279 399 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 TDRD6O60522 2096 aaKnown RBP16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 TMEM91Q6ZNR0 172 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 OR11H7Q8NGC8 314 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 OR4X1Q8NH49 305 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 FAM210BQ96KR6 192 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 CLDN14O95500 239 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 FTH1P19P0C7X4 201 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 RPL7P18124 248 aaKnown RBP16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 ACP1P24666 158 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 RNFT1Q5M7Z0 435 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 ATP5SQ99766 215 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 RBM38Q9H0Z9 239 aaKnown RBP16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 CBY3A6NI87 242 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 C11orf94C9JXX5 98 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 GGTLC2Q14390 218 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 ZNF826PQ6ZT77 177 aa16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 SLC25A10Q9UBX3 287 aaPredicted RBP16.31■□□□□ 0.2
SMARCC1-201ENST00000254480 J3QT63 122 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 HLA-GP17693 338 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 TFPI2P48307 235 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 WFDC6Q9BQY6 131 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 PRSS50Q9UI38 385 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 ZNF318Q5VUA4 2279 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 LY86O95711 162 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 RPL13AP40429 203 aaKnown RBP16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 PRSS53Q2L4Q9 553 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms