RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 DACT3Q96B18 629 aaPredicted RBP16.63■□□□□ 0.25
SNRPA-201ENST00000243563 CMSS1Q9BQ75 279 aaKnown RBP16.63■□□□□ 0.25
SNRPA-201ENST00000243563 MMP26Q9NRE1 261 aa16.63■□□□□ 0.25
SNRPA-201ENST00000243563 ZANQ9Y493 2812 aa16.62■□□□□ 0.25
SNRPA-201ENST00000243563 MEIKINA0A087WXM9 373 aa16.62■□□□□ 0.25
SNRPA-201ENST00000243563 ODAMA1E959 279 aa16.62■□□□□ 0.25
SNRPA-201ENST00000243563 SERPINE3A8MV23 424 aa16.62■□□□□ 0.25
SNRPA-201ENST00000243563 RCC1P18754 421 aaPredicted RBP16.62■□□□□ 0.25
SNRPA-201ENST00000243563 ERP29P30040 261 aaKnown RBP16.62■□□□□ 0.25
SNRPA-201ENST00000243563 KCNJ3P48549 501 aa16.62■□□□□ 0.25
SNRPA-201ENST00000243563 DGCR2P98153 550 aa16.62■□□□□ 0.25
SNRPA-201ENST00000243563 ARFRP1Q13795 201 aa16.62■□□□□ 0.25
SNRPA-201ENST00000243563 TMEM200BQ69YZ2 307 aa16.62■□□□□ 0.25
SNRPA-201ENST00000243563 GVQW1Q8N7I0 195 aa16.62■□□□□ 0.25
SNRPA-201ENST00000243563 UBALD1Q8TB05 177 aa16.62■□□□□ 0.25
SNRPA-201ENST00000243563 RPUSD1Q9UJJ7 312 aaKnown RBP16.62■□□□□ 0.25
SNRPA-201ENST00000243563 FLNAP21333 2647 aaKnown RBP16.61■□□□□ 0.25
SNRPA-201ENST00000243563 IGKV1D-8A0A087WSZ0 117 aa16.61■□□□□ 0.25
SNRPA-201ENST00000243563 TMEM30CPA0ZSE6 113 aa16.61■□□□□ 0.25
SNRPA-201ENST00000243563 FCGR3AP08637 254 aa16.61■□□□□ 0.25
SNRPA-201ENST00000243563 INHBBP09529 407 aa16.61■□□□□ 0.25
SNRPA-201ENST00000243563 CD3GP09693 182 aa16.61■□□□□ 0.25
SNRPA-201ENST00000243563 CCL3L1P16619 93 aa16.61■□□□□ 0.25
SNRPA-201ENST00000243563 NPY4RP50391 375 aa16.61■□□□□ 0.25
SNRPA-201ENST00000243563 ERVFRD-1P60508 538 aa16.61■□□□□ 0.25
SNRPA-201ENST00000243563 RPL31P62899 125 aaKnown RBP16.61■□□□□ 0.25
SNRPA-201ENST00000243563 PNLIPRP3Q17RR3 467 aa16.61■□□□□ 0.25
SNRPA-201ENST00000243563 C1orf159Q96HA4 380 aa16.61■□□□□ 0.25
SNRPA-201ENST00000243563 SDHCQ99643 169 aaPredicted RBP16.61■□□□□ 0.25
SNRPA-201ENST00000243563 SMAD7O15105 426 aaKnown RBP16.6■□□□□ 0.25
SNRPA-201ENST00000243563 GNG2P59768 71 aa16.6■□□□□ 0.25
SNRPA-201ENST00000243563 ZNF880Q6PDB4 577 aa16.6■□□□□ 0.25
SNRPA-201ENST00000243563 TRAPPC6BQ86SZ2 158 aa16.6■□□□□ 0.25
SNRPA-201ENST00000243563 FAM185AQ8N0U4 392 aa16.6■□□□□ 0.25
SNRPA-201ENST00000243563 LY6G5BQ8NDX9 201 aa16.6■□□□□ 0.25
SNRPA-201ENST00000243563 OR52I2Q8NH67 350 aa16.6■□□□□ 0.25
SNRPA-201ENST00000243563 MRGPRDQ8TDS7 321 aa16.6■□□□□ 0.25
SNRPA-201ENST00000243563 C12orf4Q9NQ89 552 aa16.6■□□□□ 0.25
SNRPA-201ENST00000243563 TEX15Q9BXT5 2789 aa16.6■□□□□ 0.25
SNRPA-201ENST00000243563 LOC105371242A0A075B767 164 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 H3BUI4 141 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 CA11O75493 328 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 IGHV4-31P0DP07 118 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 GLP1RP43220 463 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 TMEM249Q2WGJ8 235 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 PYHIN1Q6K0P9 492 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 C8orf46Q8TAG6 207 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 SETD6Q8TBK2 473 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 GPX8Q8TED1 209 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 CHMP1AQ9HD42 196 aaPredicted RBP16.59■□□□□ 0.25
SNRPA-201ENST00000243563 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.59■□□□□ 0.257e-11■■■■□ 21.6
SNRPA-201ENST00000243563 LANCL1O43813 399 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 CGB3P0DN86 165 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 CGB7P0DN87 165 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 PRSS3P35030 304 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 DLX1P56177 255 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 DLX6P56179 175 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 LSAMPQ13449 338 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 SPANXN2Q5MJ10 180 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 UTF1Q5T230 341 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 FAM53AQ6NSI3 398 aaPredicted RBP16.59■□□□□ 0.25
SNRPA-201ENST00000243563 MSI2Q96DH6 328 aaKnown RBP16.59■□□□□ 0.25
SNRPA-201ENST00000243563 SRRQ9GZT4 340 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 Q9N2K0 584 aa16.59■□□□□ 0.25
SNRPA-201ENST00000243563 MBNL3Q9NUK0 354 aaKnown RBP16.59■□□□□ 0.25
SNRPA-201ENST00000243563 TRBV6-6A0A0A6YYG2 114 aa16.58■□□□□ 0.24
SNRPA-201ENST00000243563 SSTR5P35346 364 aa16.58■□□□□ 0.24
SNRPA-201ENST00000243563 GDNFP39905 211 aa16.58■□□□□ 0.24
SNRPA-201ENST00000243563 C17orf58Q2M2W7 97 aa16.58■□□□□ 0.24
SNRPA-201ENST00000243563 BAIAP2L2Q6UXY1 529 aa16.58■□□□□ 0.24
SNRPA-201ENST00000243563 TRAPPC2LQ9UL33 140 aa16.58■□□□□ 0.24
SNRPA-201ENST00000243563 POLR3KQ9Y2Y1 108 aaPredicted RBP16.58■□□□□ 0.24
SNRPA-201ENST00000243563 WNK2Q9Y3S1 2297 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 TRBV23-1A0A0A0MS06 115 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 C12orf77C9JDV5 145 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 GPR37O15354 613 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 FOXH1O75593 365 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 MMP23AO75900 390 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 PRB3Q04118 309 aaPredicted RBP16.57■□□□□ 0.24
SNRPA-201ENST00000243563 ARL6IP1Q15041 203 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 LINC00299Q6ZSB3 139 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 C11orf42Q8N5U0 333 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 SNAPC3Q92966 411 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 ST6GALNAC5Q9BVH7 336 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 KLK11Q9UBX7 282 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 LINC00312Q9Y6C7 94 aa16.57■□□□□ 0.24
SNRPA-201ENST00000243563 PPIAL4CA0A0B4J2A2 164 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 IGHV2-70DA0A0C4DH43 119 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 A0A1W2PQ09 198 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 C15orf65H3BRN8 121 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 PPIAL4GP0DN37 164 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 MEF2CQ06413 473 aaPredicted RBP16.56■□□□□ 0.24
SNRPA-201ENST00000243563 KRTAP1-1Q07627 177 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 PYDC2Q56P42 97 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 OR52W1Q6IF63 320 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 SMIM4Q8WVI0 70 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 CORO2AQ92828 525 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 COX4I2Q96KJ9 171 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 NCOR1P1Q9H4R4 102 aa16.56■□□□□ 0.24
SNRPA-201ENST00000243563 ANAPC10Q9UM13 185 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms