RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 IFNL4K9M1U5 179 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 SIRPB1O00241 398 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 HSPB6O14558 160 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 LHBP01229 141 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 TNFRSF1AP19438 455 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 TSPAN5P62079 268 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 Q6ZS49 121 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 OVCH2Q7RTZ1 564 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 OR13C8Q8NGS7 320 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 LILRB1Q8NHL6 650 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 Q8TCH9 128 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 GIMAP1Q8WWP7 306 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 GCM1Q9NP62 436 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 OR14J1Q9UGF5 321 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 TRBV6-6A0A0A6YYG2 114 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 A0A0A6YYJ9 748 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 IL5P05113 134 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 TESK1Q15569 626 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 ZNF672Q499Z4 452 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 SLC38A6Q8IZM9 456 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 GCSAMQ8N6F7 178 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 OR11L1Q8NGX0 322 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 TERB2Q8NHR7 220 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 EGLN1Q9GZT9 426 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 GHITMQ9H3K2 345 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 MS4A5Q9H3V2 200 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 Q9N2K0 584 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 EHFQ9NZC4 300 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 RNF7Q9UBF6 113 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 HSPB11Q9Y547 144 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 NPTNQ9Y639 398 aa14.86□□□□□ -0.03
SHKBP1-224ENST00000600718 H7C1Q1 480 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 RLN1P04808 185 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 MST1LQ2TV78 715 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 ALX4Q9H161 411 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 NECAP2Q9NVZ3 263 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 LINC00862A6NCI5 91 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 EGR1P18146 543 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 SNRPD2P62316 118 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 METTL11BQ5VVY1 283 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 C9orf62Q8N4C0 152 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 ZDHHC22Q8N966 263 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 DYNLRB1Q9NP97 96 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 NUP50Q9UKX7 468 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 PPP1R3CQ9UQK1 317 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 WIPI2Q9Y4P8 454 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 AUP1Q9Y679 476 aa14.85□□□□□ -0.03
SHKBP1-224ENST00000600718 TMEM82A0PJX8 343 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 RFPL4AA6NLU0 287 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 RFPL4AL1F8VTS6 287 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 SDCBPO00560 298 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 PRB1P04280 392 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 ANXA7P20073 488 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 Q6ZPA2 131 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 SLC36A1Q7Z2H8 476 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 ZNF843Q8N446 348 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 MRPL30Q8TCC3 161 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 OR51J1Q9H342 316 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 BEX1Q9HBH7 125 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 DECR2Q9NUI1 292 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 DNAJB11Q9UBS4 358 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 HCFC1P51610 2035 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 OR2AT4A6NND4 320 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 IRF2P14316 349 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 PRDX2P32119 198 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 CCL8P80075 99 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 ZNF880Q6PDB4 577 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 GLDNQ6ZMI3 551 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 BOLLQ8N9W6 283 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 FAM222BQ8WU58 562 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 SCGB3A2Q96PL1 93 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 GPN1Q9HCN4 374 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 MYOZ1Q9NP98 299 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 SLC23A1Q9UHI7 598 aa14.84□□□□□ -0.03
SHKBP1-224ENST00000600718 KIR2DS1A0A191URI9 304 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 OR5H8P0DN80 308 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 PSG2P11465 335 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 KIR2DS4P43632 304 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 KCNJ3P48549 501 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 CEBPDP49716 269 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 HOXA4Q00056 320 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 KIR2DS1Q14954 304 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 SWI5Q1ZZU3 235 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 TOR2AQ5JU69 321 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 ATPAF1Q5TC12 328 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 ZNF497Q6ZNH5 498 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 LHFPL1Q86WI0 220 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 GAPTQ8N292 157 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 CCDC107Q8WV48 283 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 MRGPRFQ96AM1 343 aa14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 DACT3Q96B18 629 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-224ENST00000600718 CEACAM18A8MTB9 384 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 TRDCB7Z8K6 153 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 DHRS11Q6UWP2 260 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 ZCCHC24Q8N2G6 241 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 MUC15Q8N387 334 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 PLPPR1Q8TBJ4 325 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 MGAT4AQ9UM21 535 aa14.82□□□□□ -0.04
SHKBP1-224ENST00000600718 LRRC30A6NM36 301 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms