RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 PLXND1Q9Y4D7 1925 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 EVPLQ92817 2033 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 PDCD11Q14690 1871 aaKnown RBP4.87□□□□□ -1.63
LINC01538-201ENST00000588074 GAGE12HA6NDE8 117 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 M0R129 80 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 P2RX6O15547 441 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 HYPMO75409 117 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 CD34P28906 385 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 TSPOP30536 169 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 SLC6A12P48065 614 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 HINT1P49773 126 aaPredicted RBP4.86□□□□□ -1.63
LINC01538-201ENST00000588074 GNG4P50150 75 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 P2RX1P51575 399 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 GNG3P63215 75 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 ARG2P78540 354 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 SRSF1Q07955 248 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC01538-201ENST00000588074 ZNF266Q14584 549 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 TP53I3Q53FA7 332 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 AMMECR1LQ6DCA0 310 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 ZNF474Q6S9Z5 364 aaPredicted RBP4.86□□□□□ -1.63
LINC01538-201ENST00000588074 Q7L0L9 218 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 DPY19L4Q7Z388 723 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 ACOT1Q86TX2 421 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 B3GALNT2Q8NCR0 500 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 OR2T33Q8NG76 320 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 OR8G5Q8NG78 346 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 VN1R17PQ8TDU5 208 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 WIPF2Q8TF74 440 aaPredicted RBP4.86□□□□□ -1.63
LINC01538-201ENST00000588074 CAPNS2Q96L46 248 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 ZNF670Q9BS34 389 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 NIPSNAP3BQ9BS92 247 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 DUSP16Q9BY84 665 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 LYRM4Q9HD34 91 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 PIGVQ9NUD9 493 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 SLC25A37Q9NYZ2 338 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 THAP10Q9P2Z0 257 aaPredicted RBP4.86□□□□□ -1.63
LINC01538-201ENST00000588074 BOKQ9UMX3 212 aaPredicted RBP4.86□□□□□ -1.63
LINC01538-201ENST00000588074 FZD1Q9UP38 647 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 BRCA1P38398 1863 aaKnown RBP4.86□□□□□ -1.63
LINC01538-201ENST00000588074 A0A1B0GTL3 188 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 TMEM189A5PLL7 270 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 A6NIN4 97 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 HHLA1C9JL84 531 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 ZNF207O43670 478 aaKnown RBP4.86□□□□□ -1.63
LINC01538-201ENST00000588074 EDIL3O43854 480 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 UTS2O95399 124 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 TMEM50AO95807 157 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 EDN1P05305 212 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 ELAVL4P26378 380 aaKnown RBP4.86□□□□□ -1.63
LINC01538-201ENST00000588074 PTGER1P34995 402 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 AMTP48728 403 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 DNASE1L1P49184 302 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 THBS3P49746 956 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 HMGA2P52926 109 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 TPPP2P59282 170 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 CFHR1Q03591 330 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 FOXF1Q12946 379 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 MIDNQ504T8 468 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 SPATA45Q537H7 98 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 UFSP1Q6NVU6 142 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 CEACAM20Q6UY09 585 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 C1orf174Q8IYL3 243 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 MUC15Q8N387 334 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 DEFB125Q8N687 156 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 OR52R1Q8NGF1 315 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 OR2AE1Q8NHA4 323 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 DCUN1D4Q92564 292 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 NRGNQ92686 78 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 PIGTQ969N2 578 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 PTX4Q96A99 478 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 OR10C1Q96KK4 312 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 FRG2BQ96QU4 278 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 PLA2G12BQ9BX93 195 aa4.86□□□□□ -1.63
LINC01538-201ENST00000588074 PATZ1Q9HBE1 687 aaKnown RBP4.86□□□□□ -1.63
LINC01538-201ENST00000588074 CSDC2Q9Y534 153 aaKnown RBP4.86□□□□□ -1.63
LINC01538-201ENST00000588074 TRIP11Q15643 1979 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 TRAV1-2A0A0B4J238 106 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 TRAPPC6AO75865 159 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 C1QL1O75973 258 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 RCBTB2O95199 551 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 HLA-DQA2P01906 255 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 PSG2P11465 335 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 ATP6V0CP27449 155 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 ADORA2BP29275 332 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 MDH2P40926 338 aaKnown RBP4.85□□□□□ -1.63
LINC01538-201ENST00000588074 NPBWR2P48146 333 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 MTCP1P56278 107 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 SSBP1Q04837 148 aaKnown RBP4.85□□□□□ -1.63
LINC01538-201ENST00000588074 ATXN7L3Q14CW9 347 aaPredicted RBP4.85□□□□□ -1.63
LINC01538-201ENST00000588074 SLC25A52Q3SY17 297 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 ACTL10Q5JWF8 245 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 XP32Q5T750 250 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 ZNF66Q6ZN08 573 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 Q6ZVH6 145 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 FA2HQ7L5A8 372 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 SAXO1Q8IYX7 474 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 TEX26Q8N6G2 289 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 ZNF709Q8N972 641 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 LINC01356Q8N9X3 169 aa4.85□□□□□ -1.63
LINC01538-201ENST00000588074 OR10G4Q8NGN3 311 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms