RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 DNAJC9-AS1A6NH13 148 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 SIGLEC5O15389 551 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 NOS1APO75052 506 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-225ENST00000569245 MMP9P14780 707 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 ELK1P19419 428 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 BPIFB3P59826 476 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 PDCD1Q15116 288 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 RSU1Q15404 277 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 FAM189A2Q15884 450 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 SLC22A6Q4U2R8 563 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 RUSC1-AS1Q66K80 236 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 C9orf139Q6ZV77 190 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 CCDC190Q86UF4 302 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 PDZD9Q8IXQ8 264 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 BATF2Q8N1L9 274 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 POC1AQ8NBT0 407 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 TMEM185AQ8NFB2 350 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 MRPS24Q96EL2 167 aaKnown RBP11.93□□□□□ -0.5
COMMD4-225ENST00000569245 CEP19Q96LK0 163 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 TBX15Q96SF7 602 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 KCNK15Q9H427 330 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 MTCH1Q9NZJ7 389 aa11.93□□□□□ -0.5
COMMD4-225ENST00000569245 CENPVL3A0A0U1RRI6 287 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 MDFIC2A0A1B0GVS7 189 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 RFPL4AA6NLU0 287 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 RFPL4AL1F8VTS6 287 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 EIF4EP06730 217 aaKnown RBP11.92□□□□□ -0.5
COMMD4-225ENST00000569245 PGA5P0DJD9 388 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 PRTN3P24158 256 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 EFNB2P52799 333 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 PLA2G7Q13093 441 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 DEFB112Q30KQ8 113 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 OR10K2Q6IF99 312 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 ACP7Q6ZNF0 438 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 Q8IYB0 196 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 ZNRF1Q8ND25 227 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 LY6G5BQ8NDX9 201 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 TMEM104Q8NE00 496 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 S100ZQ8WXG8 99 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 DIRAS2Q96HU8 199 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 DCTN5Q9BTE1 182 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 TMEM59Q9BXS4 323 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 SIRPDQ9H106 197 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 ZMAT3Q9HA38 289 aaKnown RBP11.92□□□□□ -0.5
COMMD4-225ENST00000569245 ELL3Q9HB65 397 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-225ENST00000569245 AKIP1Q9NQ31 210 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 KPTNQ9Y664 436 aa11.92□□□□□ -0.5
COMMD4-225ENST00000569245 ANK2Q01484 3957 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 A0A0A6YYH2 397 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 IGHV1-69DA0A0B4J2H0 117 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 A0A1W2PP11 408 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 A6NJ64 397 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 FAM25AB3EWG3 89 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 FAM25CB3EWG5 89 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 FAM25GB3EWG6 89 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 CRTAPO75718 401 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-225ENST00000569245 HTR3BO95264 441 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 IGHV1-69P01742 117 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 CSTBP04080 98 aaKnown RBP11.91□□□□□ -0.5
COMMD4-225ENST00000569245 GTF2F2P13984 249 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 MGMTP16455 207 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 BCL3P20749 454 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 SERPINA2P20848 420 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 PRDX2P32119 198 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 NPBWR2P48146 333 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 ERVK11-1P61568 191 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 RPS27AP62979 156 aaKnown RBP11.91□□□□□ -0.5
COMMD4-225ENST00000569245 SLC9A3R2Q15599 337 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 NHLRC3Q5JS37 347 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 CNIH2Q6PI25 160 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 METAP1DQ6UB28 335 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-225ENST00000569245 VMO1Q7Z5L0 202 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 FAM89BQ8N5H3 189 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 OR10K1Q8NGX5 313 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 SLAMF9Q96A28 289 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 S100A16Q96FQ6 103 aaKnown RBP11.91□□□□□ -0.5
COMMD4-225ENST00000569245 SOSTQ9BQB4 213 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 NRIP2Q9BQI9 281 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 URM1Q9BTM9 101 aaKnown RBP11.91□□□□□ -0.5
COMMD4-225ENST00000569245 TM2D1Q9BX74 207 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 LPAR5Q9H1C0 372 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 TNFRSF19Q9NS68 423 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 RABL2AQ9UBK7 228 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-225ENST00000569245 OR14J1Q9UGF5 321 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 RABL2BQ9UNT1 228 aa11.91□□□□□ -0.5
COMMD4-225ENST00000569245 DOCK11Q5JSL3 2073 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 TMEM89A2RUT3 159 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 METTL21EPA6NDL7 271 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 SCGNO76038 276 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 TPPPO94811 219 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 MPIG6BO95866 241 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 CHRM2P08172 466 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 PTBP1P26599 531 aaKnown RBP eCLIP11.9□□□□□ -0.5
COMMD4-225ENST00000569245 TALDO1P37837 337 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 ZNF45Q02386 682 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 TUSC1Q2TAM9 212 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 SPANXN2Q5MJ10 180 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 FAM185AQ8N0U4 392 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 OSR2Q8N2R0 312 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 MFSD4AQ8N468 514 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms