RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PRSS22Q9GZN4 317 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 VCX3BQ9H321 246 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 TAS2R4Q9NYW5 299 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 FOXJ3Q9UPW0 622 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 ERGIC3Q9Y282 383 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 TRBV5-5A0A0J9YX44 114 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 M0QZK8 103 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 GTF2F2P13984 249 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 GTF2A1P52655 376 aaPredicted RBP13.53□□□□□ -0.24
USB1-211ENST00000565662 EFNB2P52799 333 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 WNT4P56705 351 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 SCN1BQ07699 218 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 AESQ08117 197 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 LY6EQ16553 131 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 TMEM30BQ3MIR4 351 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 OR2G6Q5TZ20 316 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 LHFPL4Q7Z7J7 247 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 Q8N2B8 174 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 OSR2Q8N2R0 312 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 TPRX1Q8N7U7 411 aa13.53□□□□□ -0.24
USB1-211ENST00000565662 KBTBD11-OT1A0A1B0GTJ5 212 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 MEGF11A6BM72 1044 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 PEX14O75381 377 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 DOC2BQ14184 412 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 RNLSQ5VYX0 342 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 OR9G1Q8NH87 305 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 FBLIM1Q8WUP2 373 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 C17orf50Q8WW18 174 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 RGP1Q92546 391 aaPredicted RBP13.52□□□□□ -0.25
USB1-211ENST00000565662 GHSRQ92847 366 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 LINC00574Q9H8X3 128 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 LIN7BQ9HAP6 207 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 GHRLQ9UBU3 117 aa13.52□□□□□ -0.25
USB1-211ENST00000565662 TET2Q6N021 2002 aaPredicted RBP13.52□□□□□ -0.25
USB1-211ENST00000565662 A6NDX4 124 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A10PA6NDY2 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A18PA6NE21 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A16PA6NEW6 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A20PA6NIJ5 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A7PA6NKC0 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A22PA8MWA6 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A12PA8MX19 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A5PA8MXJ8 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A23PA8MXZ1 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 CLIC3O95833 236 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A15PP0C7V4 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A13PP0C7W8 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A14PP0C7W9 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 FAM90A24PP0C7X0 464 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 GZMHP20718 246 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 GLP1RP43220 463 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 GLIPR1P48060 266 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 RBM11P57052 281 aaKnown RBP13.51□□□□□ -0.25
USB1-211ENST00000565662 RBM39Q14498 530 aaKnown RBP13.51□□□□□ -0.25
USB1-211ENST00000565662 ATXN7L3Q14CW9 347 aaPredicted RBP13.51□□□□□ -0.25
USB1-211ENST00000565662 HLA-DRB5Q30154 266 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 Q3ZCU0 254 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 ARSJQ5FYB0 599 aaPredicted RBP13.51□□□□□ -0.25
USB1-211ENST00000565662 MS4A15Q8N5U1 240 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 OR4P4Q8NGL7 312 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 GGHQ92820 318 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 MND1Q9BWT6 205 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 SCN3BQ9NY72 215 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 PSORS1C1Q9UIG5 152 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 ST3GAL6Q9Y274 331 aa13.51□□□□□ -0.25
USB1-211ENST00000565662 MEIKINA0A087WXM9 373 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 ERICH4A6NGS2 130 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 CA11O75493 328 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 OR7C1O76099 320 aaPredicted RBP13.5□□□□□ -0.25
USB1-211ENST00000565662 HTR3BO95264 441 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 IL1AP01583 271 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 IGLV1-47P01700 117 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 CSF1P09603 554 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 IGFBP3P17936 291 aaPredicted RBP13.5□□□□□ -0.25
USB1-211ENST00000565662 TRAT1Q6PIZ9 186 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 PIFOQ8TCI5 191 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 MYDGFQ969H8 173 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 COQ2Q96H96 371 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 PGLYRP3Q96LB9 341 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 ZNF184Q99676 751 aaPredicted RBP13.5□□□□□ -0.25
USB1-211ENST00000565662 NKX3-1Q99801 234 aaPredicted RBP13.5□□□□□ -0.25
USB1-211ENST00000565662 UQCC2Q9BRT2 126 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 MMP28Q9H239 520 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 CALYQ9NYX4 217 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 HILPDAQ9Y5L2 63 aa13.5□□□□□ -0.25
USB1-211ENST00000565662 TMEM30CPA0ZSE6 113 aa13.49□□□□□ -0.25
USB1-211ENST00000565662 GLAP06280 429 aa13.49□□□□□ -0.25
USB1-211ENST00000565662 LPLP06858 475 aa13.49□□□□□ -0.25
USB1-211ENST00000565662 CALCBP10092 127 aa13.49□□□□□ -0.25
USB1-211ENST00000565662 PRAMEF5Q5TYX0 476 aa13.49□□□□□ -0.25
USB1-211ENST00000565662 XAF1Q6GPH4 301 aa13.49□□□□□ -0.25
USB1-211ENST00000565662 AHSA2Q719I0 299 aa13.49□□□□□ -0.25
USB1-211ENST00000565662 KLHDC1Q8N7A1 406 aa13.49□□□□□ -0.25
USB1-211ENST00000565662 ZNF485Q8NCK3 441 aa13.49□□□□□ -0.25
USB1-211ENST00000565662 TFAP2CQ92754 450 aa13.49□□□□□ -0.25
USB1-211ENST00000565662 TAF15Q92804 592 aaKnown RBP eCLIP13.49□□□□□ -0.25
USB1-211ENST00000565662 NR1H4Q96RI1 486 aaPredicted RBP13.49□□□□□ -0.25
USB1-211ENST00000565662 DPCDQ9BVM2 203 aaPredicted RBP13.49□□□□□ -0.25
USB1-211ENST00000565662 ING4Q9UNL4 249 aa13.49□□□□□ -0.25
USB1-211ENST00000565662 TRAV24A0A0B4J272 114 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms