RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ZNF486Q96H40 463 aaPredicted RBP10.8□□□□□ -0.68
SPG7-209ENST00000564047 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.8□□□□□ -0.68
SPG7-209ENST00000564047 OR14J1Q9UGF5 321 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 ZNF222Q9UK12 451 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 NUBP2Q9Y5Y2 271 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 CSPG4Q6UVK1 2322 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 GABARAPH6UMI1 98 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 NDUFA2O43678 99 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 ZNF205O95201 554 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 OR2H2O95918 312 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 DHFRP00374 187 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 HIST1H1DP16402 221 aaKnown RBP10.79□□□□□ -0.68
SPG7-209ENST00000564047 DNASE1P24855 282 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 BTCP35070 178 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 ATP5J2P56134 94 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 AP3S2P59780 193 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 PDCD1Q15116 288 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 ZNF260Q3ZCT1 412 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 ZFP69Q49AA0 526 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 PLAC9Q5JTB6 97 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 ATPAF1Q5TC12 328 aaPredicted RBP10.79□□□□□ -0.68
SPG7-209ENST00000564047 IZUMO1Q8IYV9 350 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 CD177Q8N6Q3 437 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 DTX3Q8N9I9 347 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 DEFB108BQ8NET1 73 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 OR5T2Q8NGG2 359 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 SDSLQ96GA7 329 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 ARHGAP5-AS1Q96IT6 56 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 PECRQ9BY49 303 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 DNTTIP1Q9H147 329 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 TMEM165Q9HC07 324 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 PLEKHJ1Q9NW61 149 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 BEX4Q9NWD9 120 aaPredicted RBP10.79□□□□□ -0.68
SPG7-209ENST00000564047 ZNF581Q9P0T4 197 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 ALG5Q9Y673 324 aa10.79□□□□□ -0.68
SPG7-209ENST00000564047 HRNRQ86YZ3 2850 aaPredicted RBP10.79□□□□□ -0.68
SPG7-209ENST00000564047 TRAV24A0A0B4J272 114 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 C7orf66A4D0T2 115 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 SERPINE3A8MV23 424 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 SLC33A1O00400 549 aaPredicted RBP10.78□□□□□ -0.68
SPG7-209ENST00000564047 MFNGO00587 321 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 TNFRSF13BO14836 293 aaPredicted RBP10.78□□□□□ -0.68
SPG7-209ENST00000564047 PPIHO43447 177 aaKnown RBP10.78□□□□□ -0.68
SPG7-209ENST00000564047 IGHV2-70P01814 119 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 MELTFP08582 738 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 GSTP1P09211 210 aaKnown RBP10.78□□□□□ -0.68
SPG7-209ENST00000564047 AMY2BP19961 511 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 GIFP27352 417 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 MDH2P40926 338 aaKnown RBP10.78□□□□□ -0.68
SPG7-209ENST00000564047 GABRA2P47869 451 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 CEBPDP49716 269 aaPredicted RBP10.78□□□□□ -0.68
SPG7-209ENST00000564047 PDLIM4P50479 330 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 DGCR2P98153 550 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 KLF9Q13886 244 aaPredicted RBP10.78□□□□□ -0.68
SPG7-209ENST00000564047 RBM39Q14498 530 aaKnown RBP10.78□□□□□ -0.68
SPG7-209ENST00000564047 ZMYND11Q15326 602 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 PNLIPRP3Q17RR3 467 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 CDNFQ49AH0 187 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 NKAPLQ5M9Q1 402 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 ZNF788Q6ZQV5 615 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 DNM1P46Q6ZS02 220 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 C6orf201Q7Z4U5 140 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 LRRC75A-AS1Q8N1F1 130 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 MUC20Q8N307 709 aaPredicted RBP10.78□□□□□ -0.68
SPG7-209ENST00000564047 SUMF2Q8NBJ7 301 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 ST8SIA4Q92187 359 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 NINJ1Q92982 152 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 MBD6Q96DN6 1003 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 FOXC2Q99958 501 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 ZNF665Q9H7R5 613 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 AUNIPQ9H7T9 357 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 MRPS7Q9Y2R9 242 aaKnown RBP10.78□□□□□ -0.68
SPG7-209ENST00000564047 KCNK7Q9Y2U2 307 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 RBMX2Q9Y388 322 aaKnown RBP10.78□□□□□ -0.68
SPG7-209ENST00000564047 DSCAMO60469 2012 aa10.78□□□□□ -0.68
SPG7-209ENST00000564047 NKX6-3A6NJ46 265 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 MCRIP1C9JLW8 97 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 NDUFS8O00217 210 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 SIRPB1O00241 398 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 RGS13O14921 159 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 CA11O75493 328 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 GYPAP02724 150 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 GSTT2BP0CG30 244 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 GNB3P16520 340 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 GPR6P46095 362 aaPredicted RBP10.77□□□□□ -0.69
SPG7-209ENST00000564047 RRAS2P62070 204 aaPredicted RBP10.77□□□□□ -0.69
SPG7-209ENST00000564047 COL10A1Q03692 680 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 DEFB113Q30KQ7 82 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 TMEM155Q4W5P6 130 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 PAN3Q58A45 887 aaKnown RBP10.77□□□□□ -0.69
SPG7-209ENST00000564047 SHEQ5VZ18 495 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 ZNF561Q8N587 486 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 ZNF525Q8N782 197 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 PPP1R35Q8TAP8 253 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 PERPQ96FX8 193 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 MED30Q96HR3 178 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 SNX22Q96L94 193 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 CCL13Q99616 98 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 SULT4A1Q9BR01 284 aa10.77□□□□□ -0.69
SPG7-209ENST00000564047 TMEM246Q9BRR3 403 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms