RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 VAX1Q5SQQ9 334 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 OR10K2Q6IF99 312 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 ALKAL2Q6UX46 152 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 ACOT7LQ6ZUV0 252 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 FAM57BQ71RH2 274 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 DOK3Q7L591 496 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 NAA40Q86UY6 237 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 SPERTQ8NA61 448 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 CHST4Q8NCG5 386 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 BVESQ8NE79 360 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 SLC30A7Q8NEW0 376 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 OR1S1Q8NH92 325 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 KCNG3Q8TAE7 436 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 PCNPQ8WW12 178 aaKnown RBP8.73□□□□□ -1.01
TPM1-212ENST00000558347 ST8SIA2Q92186 375 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 PGAM5Q96HS1 289 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 POM121L2Q96KW2 1035 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 CXorf58Q96LI9 332 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 SCGB3A2Q96PL1 93 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 C1QTNF5Q9BXJ0 243 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 BPESC1Q9GZL8 116 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 OR51B6Q9H340 312 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 DYNLRB1Q9NP97 96 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.73□□□□□ -1.01
TPM1-212ENST00000558347 RASL12Q9NYN1 266 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 ZNF319Q9P2F9 582 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 GHRLQ9UBU3 117 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 SHPKQ9UHJ6 478 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 ZNF391Q9UJN7 358 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 FBXO9Q9UK97 447 aaPredicted RBP8.73□□□□□ -1.01
TPM1-212ENST00000558347 RTTNQ86VV8 2226 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 CEACAM18A8MTB9 384 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 LYNX1G3V0Z9 82 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 J3QW42 95 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 IFNA6P05013 189 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 FCER2P06734 321 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 LYNX1P0DP58 116 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 SLC2A1P11166 492 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 DAOP14920 347 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 ZNF16P17020 682 aaPredicted RBP8.72□□□□□ -1.01
TPM1-212ENST00000558347 APLNRP35414 380 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 ALDH3B1P43353 468 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 SLC6A9P48067 706 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 ERVS71-1P61550 626 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 CYCSP99999 105 aaKnown RBP8.72□□□□□ -1.01
TPM1-212ENST00000558347 AWAT2Q6E213 333 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 HOGA1Q86XE5 327 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 OR5AS1Q8N127 324 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 ARRDC1Q8N5I2 433 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 PXT1Q8NFP0 134 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 OR51E1Q8TCB6 317 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 NEU4Q8WWR8 484 aaPredicted RBP8.72□□□□□ -1.01
TPM1-212ENST00000558347 SHARPINQ9H0F6 387 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 OR10A2Q9H208 303 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 RGCCQ9H4X1 137 aa8.72□□□□□ -1.01
TPM1-212ENST00000558347 MRPS28Q9Y2Q9 187 aaKnown RBP8.72□□□□□ -1.01
TPM1-212ENST00000558347 SSX5O60225 188 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 CA11O75493 328 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 LCATP04180 440 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 HIST1H1DP16402 221 aaKnown RBP8.71□□□□□ -1.01
TPM1-212ENST00000558347 ANOS1P23352 680 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 RPS23P62266 143 aaKnown RBP8.71□□□□□ -1.01
TPM1-212ENST00000558347 PPP1R1AQ13522 171 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 ARL6IP1Q15041 203 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 SNAI3Q3KNW1 292 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 CYB5R2Q6BCY4 276 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 ANGPTL5Q86XS5 388 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 SLC38A6Q8IZM9 456 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 STPG2Q8N412 459 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 OR56B1Q8NGI3 324 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 OR13C9Q8NGT0 318 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 SPSB4Q96A44 273 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 MRGPRFQ96AM1 343 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 C10orf35Q96D05 121 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 LINC00052Q96N35 136 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 NKX3-1Q99801 234 aaPredicted RBP8.71□□□□□ -1.01
TPM1-212ENST00000558347 OCSTAMPQ9BR26 566 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 SOX7Q9BT81 388 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 URM1Q9BTM9 101 aaKnown RBP8.71□□□□□ -1.01
TPM1-212ENST00000558347 PDCD10Q9BUL8 212 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 CST11Q9H112 138 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 LPAR5Q9H1C0 372 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 CDH20Q9HBT6 801 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 DUSP13Q9UII6 198 aa8.71□□□□□ -1.01
TPM1-212ENST00000558347 TRBV6-7A0A0A0MS04 114 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 C5orf49A4QMS7 147 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 LRP5LA4QPB2 252 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 C5orf63A6NC05 138 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 DBX1A6NMT0 343 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 DHRS7CA6NNS2 312 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 XRCC2O43543 280 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 CDC14BO60729 498 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 HRH1P35367 487 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 IL13RA1P78552 427 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 TBC1D28Q2M2D7 210 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 ALKBH6Q3KRA9 238 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 GLIPR1L1Q6UWM5 242 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 MOB3CQ70IA8 216 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 ZNF101Q8IZC7 436 aa8.7□□□□□ -1.02
TPM1-212ENST00000558347 TMEM185AQ8NFB2 350 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms