RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SELEP16581 610 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 ZNF708P17019 499 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 TUBG1P23258 451 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 MAS1LP35410 378 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 PRSS12P56730 875 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 RPL27P61353 136 aaKnown RBP4.59□□□□□ -1.68
PROM1-220ENST00000540805 SUPT4H1P63272 117 aaKnown RBP4.59□□□□□ -1.68
PROM1-220ENST00000540805 TLE1Q04724 770 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 CD226Q15762 336 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.59□□□□□ -1.68
PROM1-220ENST00000540805 CLEC12BQ2HXU8 276 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 CT45A2Q5DJT8 189 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 FBXW12Q6X9E4 464 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 LYPD6Q86Y78 171 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 CISD2Q8N5K1 135 aaKnown RBP4.59□□□□□ -1.68
PROM1-220ENST00000540805 OR14K1Q8NGZ2 314 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 CNTNAP3Q9BZ76 1288 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 LSM5Q9Y4Y9 91 aaKnown RBP4.59□□□□□ -1.68
PROM1-220ENST00000540805 PCDH15Q96QU1 1955 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 THADAQ6YHU6 1953 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 IGLV1-36A0A0B4J1U3 117 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 CEACAM18A8MTB9 384 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 GFRA3O60609 400 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 ZNF354AO60765 605 aaPredicted RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 AGFG2O95081 481 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 SCAF4O95104 1147 aaKnown RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 ISG15P05161 165 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 CTSBP07858 339 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 B4GALT1P15291 398 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 KLK2P20151 261 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 CEACAM8P31997 349 aaPredicted RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 RPS23P62266 143 aaKnown RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 IL15RAQ13261 267 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 ACKR1Q16570 336 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 IAH1Q2TAA2 248 aaPredicted RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 ARFGEF3Q5TH69 2177 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 HEPN1Q6WQI6 88 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 H1FNTQ75WM6 255 aaPredicted RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 DCXRQ7Z4W1 244 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 OR52N4Q8NGI2 321 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 OR11L1Q8NGX0 322 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 OR1L3Q8NH93 324 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 UBALD1Q8TB05 177 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 HPSE2Q8WWQ2 592 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 RDH5Q92781 318 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 FGGYQ96C11 551 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 SNX22Q96L94 193 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 ZPBPQ9BS86 351 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 SLC35B3Q9H1N7 401 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 G6PC2Q9NQR9 355 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 C1orf123Q9NWV4 160 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 OCIAD1Q9NX40 245 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 HDGFL3Q9Y3E1 203 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 COL5A1P20908 1838 aaPredicted RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 LRRK2Q5S007 2527 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 BORCS7-ASMTA0A0B4J1R7 106 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 TRAV17A0A0B4J275 112 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 SRSF10O75494 262 aaKnown RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 BGLAPP02818 100 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 CHRM2P08172 466 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 CTLA4P16410 223 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 THBS4P35443 961 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 TMEM33P57088 247 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 ERVFRD-1P60508 538 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 PKIAP61925 76 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 QRFPP83859 136 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 NHLH2Q02577 135 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 OR1C1Q15619 314 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 RNF151Q2KHN1 245 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 RPUSD3Q6P087 351 aaKnown RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 CBLN3Q6UW01 205 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 GRINAQ7Z429 371 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 ERASQ7Z444 233 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 CMTM1Q8IZ96 169 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 FNDC9Q8TBE3 224 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 PRRX2Q99811 253 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 RARRES2Q99969 163 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 RTBDNQ9BSG5 229 aaPredicted RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 NICN1Q9BSH3 213 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 C19orf12Q9NSK7 152 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 ANAPC10Q9UM13 185 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 FAM221AA4D161 298 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 C5orf49A4QMS7 147 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 TMEM14DPA8MWL7 114 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 ZNF732B4DXR9 585 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 SEC14L6B5MCN3 397 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 TSTD3H0UI37 97 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 HS3ST1O14792 307 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 DEDDO75618 318 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 IFNA10P01566 189 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 SEC11BP0C7V7 166 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 DANCRP0C864 163 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 HIST1H1DP16402 221 aaKnown RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 DUSP1P28562 367 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 BLVRBP30043 206 aaPredicted RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 ASCL1P50553 236 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 NXPH1P58417 271 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 ERVK-16P61578 105 aa4.58□□□□□ -1.68
PROM1-220ENST00000540805 RPL11P62913 178 aaKnown RBP4.58□□□□□ -1.68
PROM1-220ENST00000540805 MRPS11P82912 194 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms