RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ZNF146Q15072 292 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 SMIM21Q3B7S5 101 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 BEX5Q5H9J7 111 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 ATPAF1Q5TC12 328 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-214ENST00000495485 SHEQ5VZ18 495 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 DHRS11Q6UWP2 260 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 LYG2Q86SG7 212 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 PIAS4Q8N2W9 510 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-214ENST00000495485 UXS1Q8NBZ7 420 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 OR2AK2Q8NG84 335 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 OR2Z1Q8NG97 314 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 OR13C8Q8NGS7 320 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 COQ8AQ8NI60 647 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 MARCH1Q8TCQ1 289 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 ERGIC1Q969X5 290 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 MARVELD3Q96A59 401 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 SYT3Q9BQG1 590 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 NRIP2Q9BQI9 281 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 FGF23Q9GZV9 251 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-214ENST00000495485 TLNRD1Q9H1K6 362 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 FN3KRPQ9HA64 309 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 SEBOXQ9HB31 216 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-214ENST00000495485 SLC23A1Q9UHI7 598 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 ZNF230Q9UIE0 474 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-214ENST00000495485 POU2F3Q9UKI9 436 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 GPR132Q9UNW8 380 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 KCNIP3Q9Y2W7 256 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 IGLV3-9A0A075B6K5 115 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 A0A0B4J2A0 478 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 hCG_1807616A0A1W2PRN6 198 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 FAM221AA4D161 298 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 A8MV72 311 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 TRDCB7Z8K6 153 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 C19orf84I3L1E1 186 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 LILRA1O75019 489 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 DUS4LO95620 317 aaKnown RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 HPXP02790 462 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 TK1P04183 234 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 AKR1C4P17516 323 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 GLRA1P23415 457 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 DNASE1P24855 282 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 GRNP28799 593 aaKnown RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 CCKARP32238 428 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 CFHR2P36980 270 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 UCP3P55916 312 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 SEC61A1P61619 476 aaKnown RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 CYCSP99999 105 aaKnown RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 CD300CQ08708 224 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 FGL1Q08830 312 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 KCNJ8Q15842 424 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 ABCA11PQ4W5N1 156 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 PAN3Q58A45 887 aaKnown RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 SLC22A25Q6T423 547 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 WFDC8Q8IUA0 241 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 SGPP2Q8IWX5 399 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 CCDC71LQ8N9Z2 235 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 SUMF2Q8NBJ7 301 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 LILRB1Q8NHL6 650 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 MRPL24Q96A35 216 aaKnown RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 ZNF486Q96H40 463 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 DMRTB1Q96MA1 342 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 FYTTD1Q96QD9 318 aaKnown RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 ZNF2Q9BSG1 426 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 DPCDQ9BVM2 203 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 CRIM1Q9NZV1 1036 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 TAAR3PQ9P1P4 343 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 SHPKQ9UHJ6 478 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 PAIP2BQ9ULR5 123 aaKnown RBP8.69□□□□□ -1.02
HDAC3-214ENST00000495485 PCDHB10Q9UN67 800 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 NPTNQ9Y639 398 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 ATP23Q9Y6H3 246 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 DSCAMO60469 2012 aa8.69□□□□□ -1.02
HDAC3-214ENST00000495485 MYO9AB2RTY4 2548 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 FAM172BPA6NC97 362 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 A6NNC1 897 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 ATP6V1G2-DDX39BF2Z307 99 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 F5H5P2 479 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 H0YL77 283 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 SDCBPO00560 298 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-214ENST00000495485 HS3ST1O14792 307 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 FABP7O15540 132 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 MLNRO43193 412 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 RHBDL1O75783 438 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 NAPSAO96009 420 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 KNG1P01042 644 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 CTSDP07339 412 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-214ENST00000495485 VSIG10L2P0DP72 767 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 TNFRSF1AP19438 455 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 VAMP1P23763 118 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 GZMKP49863 264 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 NPY4RP50391 375 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 ZNF81P51508 661 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 ALKBH6Q3KRA9 238 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 VHLLQ6RSH7 139 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 LHFPL1Q86WI0 220 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 FAM185AQ8N0U4 392 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 MUC20Q8N307 709 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-214ENST00000495485 ZBTB8BQ8NAP8 495 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-214ENST00000495485 OR11H7Q8NGC8 314 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 OR11L1Q8NGX0 322 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms