RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	FPR2	P25090	351 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	BLVRB	P30043	206 aa	Predicted RBP	10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	HILS1	P60008	231 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	LCN2	P80188	198 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	NKAPL	Q5M9Q1	402 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	NLRC3	Q7RTR2	1065 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	LAX1	Q8IWV1	398 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM216B	Q8N7L0	139 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	DTX3	Q8N9I9	347 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	ASCC1	Q8N9N2	400 aa	Known RBP	10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	CHST4	Q8NCG5	386 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	RAB40A	Q8WXH6	277 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	S100A16	Q96FQ6	103 aa	Known RBP	10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	NEDD4L	Q96PU5	975 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	DNTTIP1	Q9H147	329 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	ABCG5	Q9H222	651 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	MIXL1	Q9H2W2	232 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	PTTG2	Q9NZH5	202 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	MIOX	Q9UGB7	285 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	OPN4	Q9UHM6	478 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	A3GALT2	U3KPV4	340 aa		10.82	□□□□□ -0.68
NR1H3-223	ENST00000486991	MGAM2	Q2M2H8	2515 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991		A0A1B0GW55	424 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A10P	A6NDY2	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A18P	A6NE21	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A16P	A6NEW6	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A20P	A6NIJ5	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A8P	A6NJQ4	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A7P	A6NKC0	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A22P	A8MWA6	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A12P	A8MX19	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A5P	A8MXJ8	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A23P	A8MXZ1	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	TNFRSF13B	O14836	293 aa	Predicted RBP	10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	SIGLEC5	O15389	551 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	PDCD6	O75340	191 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	APOA1	P02647	267 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A15P	P0C7V4	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A13P	P0C7W8	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A14P	P0C7W9	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM90A24P	P0C7X0	464 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	DUX4L2	P0CJ85	424 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	DUX4L3	P0CJ86	424 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	DUX4L4	P0CJ87	422 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	DUX4L5	P0CJ88	424 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	DUX4L6	P0CJ89	424 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	DUX4L7	P0CJ90	424 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	SELL	P14151	372 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FUT3	P21217	361 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	S100A5	P33763	92 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	COMP	P49747	757 aa	Predicted RBP	10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	IL13RA1	P78552	427 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	MADCAM1	Q13477	382 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	MOGAT2	Q3SYC2	334 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	PAN3	Q58A45	887 aa	Known RBP	10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	RAB12	Q6IQ22	244 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	BRICD5	Q6PL45	260 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	DUX4L9	Q6RFH8	374 aa	Predicted RBP	10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	ZNF788	Q6ZQV5	615 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	SLC36A1	Q7Z2H8	476 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	ZNF561	Q8N587	486 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM89B	Q8N5H3	189 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	SUMF2	Q8NBJ7	301 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	ZNRF1	Q8ND25	227 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	TMEM185A	Q8NFB2	350 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	OR10R2	Q8NGX6	335 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	NEK7	Q8TDX7	302 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAM216A	Q8WUB2	273 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	DACT3	Q96B18	629 aa	Predicted RBP	10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	SDSL	Q96GA7	329 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	MED30	Q96HR3	178 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	CMTM3	Q96MX0	182 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	SUCNR1	Q9BXA5	334 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	CHST6	Q9GZX3	395 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	SEBOX	Q9HB31	216 aa	Predicted RBP	10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	SPACA1	Q9HBV2	294 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	DIABLO	Q9NR28	239 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	DUX4	Q9UBX2	424 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	ADAM30	Q9UKF2	790 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	MAB21L2	Q9Y586	359 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	PEX16	Q9Y5Y5	336 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	TRRAP	Q9Y4A5	3859 aa		10.81	□□□□□ -0.68
NR1H3-223	ENST00000486991	CMYA5	Q8N3K9	4069 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	TRAV24	A0A0B4J272	114 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	TMEM82	A0PJX8	343 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991		H3BUI4	141 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	TRIM77	I1YAP6	450 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	SLC33A1	O00400	549 aa	Predicted RBP	10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	NDUFB3	O43676	98 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	CLPX	O76031	633 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	SCGN	O76038	276 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	CDK2	P24941	298 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	CHAT	P28329	748 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	PAX2	Q02962	417 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	SIGIRR	Q6IA17	410 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	BTNL3	Q6UXE8	466 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991		Q6ZTK2	550 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	C6orf201	Q7Z4U5	140 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms