RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 SEC11BP0C7V7 166 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 TUFMP49411 452 aaKnown RBP2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 SLC18A1P54219 525 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 AP3S2P59780 193 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 BNIP2Q12982 314 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 DYNC1I2Q13409 638 aaKnown RBP2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 ELOCQ15369 112 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 BSXQ3C1V8 233 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 MRPL2Q5T653 305 aaKnown RBP2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 FAM131AQ6UXB0 335 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 MRPL52Q86TS9 123 aaKnown RBP2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 CCNYL1Q8N7R7 359 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 ZDHHC22Q8N966 263 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 LFNGQ8NES3 379 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 OR5H2Q8NGV7 314 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 IFT81Q8WYA0 676 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 CMTM5Q96DZ9 223 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 SPACA5Q96QH8 159 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 PEBP4Q96S96 227 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 ZNF649Q9BS31 505 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 THTPAQ9BU02 230 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 TSGA10Q9BZW7 698 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 CENPHQ9H3R5 247 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 TRIM45Q9H8W5 580 aaPredicted RBP2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 RDH14Q9HBH5 336 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 SND1-IT1Q9HBX3 110 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 TMBIM4Q9HC24 238 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 SDHAF2Q9NX18 166 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 FBXL3Q9UKT7 428 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 TBL2Q9Y4P3 447 aaKnown RBP2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 INSIG2Q9Y5U4 225 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 ABCB11O95342 1321 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 SLC5A10A0PJK1 596 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 IZUMO1RA6ND01 250 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 UPK1AO00322 258 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 RGS5O15539 181 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 OR2A4O95047 310 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 KCNK2O95069 426 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 CXorf1O96002 111 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 ZNF7P17097 686 aaPredicted RBP2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 COILP38432 576 aaPredicted RBP2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 MAGEA3P43357 314 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 POLR2GP62487 172 aaKnown RBP eCLIP2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 GLO1Q04760 184 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 TSPAN31Q12999 210 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 FLOT2Q14254 428 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 ZNHIT3Q15649 155 aaPredicted RBP2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 TMEM249Q2WGJ8 235 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 AKIRIN2Q53H80 203 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 ACTBL2Q562R1 376 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 USP50Q70EL3 339 aaPredicted RBP2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 TMEM251Q8N6I4 163 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 ATP6V1C2Q8NEY4 427 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 OR8A1Q8NGG7 326 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 OR5D18Q8NGL1 313 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 RNASEH2CQ8TDP1 164 aaKnown RBP2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 DOK4Q8TEW6 326 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 OR2A7Q96R45 310 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 VAT1Q99536 393 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 BEX2Q9BXY8 128 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 PRORYQ9H606 182 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 ASCL3Q9NQ33 180 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 NLE1Q9NVX2 485 aaPredicted RBP2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 TAS2R9Q9NYW1 312 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 TAS2R1Q9NYW7 299 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 ANXA10Q9UJ72 324 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 C3orf18Q9UK00 162 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 SLC22A13Q9Y226 551 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 KLF13Q9Y2Y9 288 aaPredicted RBP2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 TSPOAP1O95153 1857 aa2.34□□□□□ -2.03
SMNDC1-205ENST00000477763 IGKV3D-11A0A0A0MRZ8 115 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 KIR2DS1A0A191URI9 304 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 A0A1B0GX12 115 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 GMNCA6NCL1 334 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 OR5K4A6NMS3 321 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 H3BQV1 296 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 M0R036 132 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 IFNA5P01569 189 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 GIMD1P0DJR0 217 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 COX5BP10606 129 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 HIST1H1CP16403 213 aaKnown RBP2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 TAC1P20366 129 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 HSD11B1P28845 292 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 HSPA13P48723 471 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 NKX2-5P52952 324 aaPredicted RBP2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 ARF6P62330 175 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 ZNF235Q14590 738 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 NIPAL1Q6NVV3 410 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 DRAM2Q6UX65 266 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 Q8N402 240 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 C2orf73Q8N5S3 287 aaPredicted RBP2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 OR8K1Q8NGG5 319 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 OR51Q1Q8NH59 317 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 ITLN2Q8WWU7 325 aaPredicted RBP2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 OPTNQ96CV9 577 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 TVP23CQ96ET8 276 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 QKIQ96PU8 341 aaKnown RBP eCLIP2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 HBEGFQ99075 208 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 HRASLSQ9HDD0 168 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 BABAM2Q9NXR7 383 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms