RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 TRAV30A0A087WSZ9 112 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 A0A1B0GUS0 222 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 PDGFBP01127 241 aaPredicted RBP11.99□□□□□ -0.49
HDAC1-206ENST00000476391 HLA-HP01893 362 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 AADACP22760 399 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 HNRNPA3P51991 378 aaKnown RBP11.99□□□□□ -0.49
HDAC1-206ENST00000476391 MRPS34P82930 218 aaKnown RBP11.99□□□□□ -0.49
HDAC1-206ENST00000476391 ZNF726P1Q15940 193 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 NNATQ16517 81 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 OR5AU1Q8NGC0 362 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 OR51E1Q8TCB6 317 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 RNF2Q99496 336 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 HSPB9Q9BQS6 159 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 RPH3ALQ9UNE2 315 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 ST3GAL6Q9Y274 331 aa11.99□□□□□ -0.49
HDAC1-206ENST00000476391 NDUFS8O00217 210 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 ZNF737O75373 536 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 DXOO77932 396 aaKnown RBP11.98□□□□□ -0.49
HDAC1-206ENST00000476391 VENTXO95231 258 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 CYBAP13498 195 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 CDKN1AP38936 164 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 EXT1Q16394 746 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 SLAMF6Q96DU3 332 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 PSMG3Q9BT73 122 aaPredicted RBP11.98□□□□□ -0.49
HDAC1-206ENST00000476391 SERGEFQ9UGK8 458 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 NXT1Q9UKK6 140 aaKnown RBP11.98□□□□□ -0.49
HDAC1-206ENST00000476391 ZNF850A8MQ14 1090 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 NRG2O14511 850 aaPredicted RBP11.98□□□□□ -0.49
HDAC1-206ENST00000476391 WDR1O75083 606 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 GLI4P10075 376 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 NPBWR2P48146 333 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 ZNF133P52736 654 aaPredicted RBP11.98□□□□□ -0.49
HDAC1-206ENST00000476391 FGF8P55075 233 aaPredicted RBP11.98□□□□□ -0.49
HDAC1-206ENST00000476391 PDGFRLQ15198 375 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 VHLLQ6RSH7 139 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 TMEM144Q7Z5S9 345 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 SUMF1Q8NBK3 374 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 ZNF524Q96C55 264 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 PGAM5Q96HS1 289 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 TXN2Q99757 166 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 HEBP2Q9Y5Z4 205 aa11.98□□□□□ -0.49
HDAC1-206ENST00000476391 PRR19A6NJB7 356 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 SUMO1P63165 101 aaKnown RBP11.97□□□□□ -0.49
HDAC1-206ENST00000476391 ZNF154Q13106 437 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 C1orf174Q8IYL3 243 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 ZNF709Q8N972 641 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 APH1AQ96BI3 265 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 RPUSD4Q96CM3 377 aaKnown RBP11.97□□□□□ -0.49
HDAC1-206ENST00000476391 ZBP1Q9H171 429 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 PARLQ9H300 379 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 TUBG2Q9NRH3 451 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 PLEKHJ1Q9NW61 149 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 BET1LQ9NYM9 111 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 A0A0U1RQK1 487 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 ZNF320A2RRD8 509 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 HRKO00198 91 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 TNFSF14O43557 240 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 TIAF1O95411 115 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 IGLC2P0DOY2 106 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 IGLC3P0DOY3 106 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 CD99P14209 185 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 SLC6A8P48029 635 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 BLKP51451 505 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 FXYD4P59646 89 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 SERF2P84101 59 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 ID3Q02535 119 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 SPATA45Q537H7 98 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 OCIAD2Q56VL3 154 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 MEX3BQ6ZN04 569 aaKnown RBP11.97□□□□□ -0.49
HDAC1-206ENST00000476391 Q6ZN92 141 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 WDFY1Q8IWB7 410 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 FGF14Q92915 247 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 ZNF286AQ9HBT8 521 aa11.97□□□□□ -0.49
HDAC1-206ENST00000476391 PHF3Q92576 2039 aaKnown RBP11.96□□□□□ -0.49
HDAC1-206ENST00000476391 M0QZ24 198 aa11.96□□□□□ -0.49
HDAC1-206ENST00000476391 HYPMO75409 117 aa11.96□□□□□ -0.49
HDAC1-206ENST00000476391 DTYMKP23919 212 aa11.96□□□□□ -0.49
HDAC1-206ENST00000476391 YPEL3P61236 119 aaPredicted RBP11.96□□□□□ -0.49
HDAC1-206ENST00000476391 PPP1CBP62140 327 aa11.96□□□□□ -0.49
HDAC1-206ENST00000476391 ELAVL3Q14576 367 aaKnown RBP11.96□□□□□ -0.49
HDAC1-206ENST00000476391 SHBQ15464 509 aa11.96□□□□□ -0.49
HDAC1-206ENST00000476391 MSMO1Q15800 293 aa11.96□□□□□ -0.49
HDAC1-206ENST00000476391 C6orf201Q7Z4U5 140 aa11.96□□□□□ -0.49
HDAC1-206ENST00000476391 ABHD12BQ7Z5M8 362 aaPredicted RBP11.96□□□□□ -0.49
HDAC1-206ENST00000476391 CRIPAKQ8N1N5 446 aa11.96□□□□□ -0.49
HDAC1-206ENST00000476391 SLC46A1Q96NT5 459 aa11.96□□□□□ -0.49
HDAC1-206ENST00000476391 MRPS16Q9Y3D3 137 aaKnown RBP11.96□□□□□ -0.49
HDAC1-206ENST00000476391 SHISA7A6NL88 538 aa11.96□□□□□ -0.5
HDAC1-206ENST00000476391 HS3ST1O14792 307 aa11.96□□□□□ -0.5
HDAC1-206ENST00000476391 TNFRSF10CO14798 259 aa11.96□□□□□ -0.5
HDAC1-206ENST00000476391 TMEM50AO95807 157 aa11.96□□□□□ -0.5
HDAC1-206ENST00000476391 GYPAP02724 150 aa11.96□□□□□ -0.5
HDAC1-206ENST00000476391 TNFSF4P23510 183 aa11.96□□□□□ -0.5
HDAC1-206ENST00000476391 FOXL1Q12952 345 aa11.96□□□□□ -0.5
HDAC1-206ENST00000476391 KISS1Q15726 138 aa11.96□□□□□ -0.5
HDAC1-206ENST00000476391 CXorf66Q5JRM2 361 aaPredicted RBP11.96□□□□□ -0.5
HDAC1-206ENST00000476391 CNKSR3Q6P9H4 555 aa11.96□□□□□ -0.5
HDAC1-206ENST00000476391 TMPRSS7Q7RTY8 843 aa11.96□□□□□ -0.5
HDAC1-206ENST00000476391 COMMD2Q86X83 199 aa11.96□□□□□ -0.5
HDAC1-206ENST00000476391 CALHM1Q8IU99 346 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms