RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 ZXDAP98168 799 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 OC90Q02509 493 aaPredicted RBP4.29□□□□□ -1.72
EPHA3-202ENST00000452448 SLC10A2Q12908 348 aaPredicted RBP4.29□□□□□ -1.72
EPHA3-202ENST00000452448 CCL15Q16663 113 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 CDO1Q16878 200 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 RPEL1Q2QD12 228 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 CT45A1Q5HYN5 189 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 PRSS36Q5K4E3 855 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 Q6ZN92 141 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 TEX43Q6ZNM6 134 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 ADGRE4PQ86SQ3 457 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 IQCF1Q8N6M8 205 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 CT45A3Q8NHU0 189 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 ACER1Q8TDN7 264 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 TMEM171Q8WVE6 324 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 RAB39BQ96DA2 213 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 PCED1BQ96HM7 432 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 HPDLQ96IR7 371 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 HIST1H2AAQ96QV6 131 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 TSSK6Q9BXA6 273 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 ELL3Q9HB65 397 aaPredicted RBP4.29□□□□□ -1.72
EPHA3-202ENST00000452448 TXNL4BQ9NX01 149 aaKnown RBP4.29□□□□□ -1.72
EPHA3-202ENST00000452448 KLHL13Q9P2N7 655 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 TESQ9UGI8 421 aaKnown RBP4.29□□□□□ -1.72
EPHA3-202ENST00000452448 RAXQ9Y2V3 346 aa4.29□□□□□ -1.72
EPHA3-202ENST00000452448 GXYLT2A0PJZ3 443 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 LRP5LA4QPB2 252 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 OR2T8A6NH00 312 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 J3QR89 54 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 APOC4-APOC2K7ER74 178 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 SOX14O95416 240 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 APOC2P02655 101 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 CSN2P05814 226 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 LIMS3P0CW19 117 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 LIMS4P0CW20 117 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 AKAIN1P0CW23 69 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 SLURP2P0DP57 97 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 PGCP20142 388 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 RPL22P35268 128 aaKnown RBP4.28□□□□□ -1.72
EPHA3-202ENST00000452448 TSFMP43897 325 aaKnown RBP4.28□□□□□ -1.72
EPHA3-202ENST00000452448 PTH2RP49190 550 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 EMP1P54849 157 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 GNG5P63218 68 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 ADAM8P78325 824 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 TBR1Q16650 682 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 RAB6CQ53S08 254 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 VWA2Q5GFL6 755 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 OLFML2AQ68BL7 652 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 EPGNQ6UW88 154 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 LINC00336Q6ZUF6 198 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 PLXDC1Q8IUK5 500 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 ZADH2Q8N4Q0 377 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 SCCPDHQ8NBX0 429 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 GPR32P1Q8NGA4 272 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 IL17DQ8TAD2 202 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 C8orf46Q8TAG6 207 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 MUCL1Q96DR8 90 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 SDSLQ96GA7 329 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 MCEEQ96PE7 176 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 CDX2Q99626 313 aaPredicted RBP4.28□□□□□ -1.72
EPHA3-202ENST00000452448 RAB6CQ9H0N0 254 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 TUBB1Q9H4B7 451 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 HES4Q9HCC6 221 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 KCNE5Q9UJ90 142 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 HS3ST3B1Q9Y662 390 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 SRCAPQ6ZRS2 3230 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 TRAV36DV7A0A075B6V5 113 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 OR2M5A3KFT3 312 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 C3orf70A6NLC5 250 aaPredicted RBP4.28□□□□□ -1.72
EPHA3-202ENST00000452448 E7EQ34 232 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 PHF1O43189 567 aaPredicted RBP4.28□□□□□ -1.72
EPHA3-202ENST00000452448 CHST1O43916 411 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 PRAF2O60831 178 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 CHRM4P08173 479 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 TNFRSF1BP20333 461 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 TACR1P25103 407 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 ATP6V0CP27449 155 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 PYCR1P32322 319 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 RPL3P39023 403 aaKnown RBP4.28□□□□□ -1.72
EPHA3-202ENST00000452448 NSG1P42857 185 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 SLC25A11Q02978 314 aaKnown RBP4.28□□□□□ -1.72
EPHA3-202ENST00000452448 RAB40BQ12829 278 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 ENDOGQ14249 297 aaKnown RBP4.28□□□□□ -1.72
EPHA3-202ENST00000452448 PAFAH1B3Q15102 231 aaKnown RBP4.28□□□□□ -1.72
EPHA3-202ENST00000452448 AADACL3Q5VUY0 350 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 OPN5Q6U736 354 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 LINC00114Q6XXX2 140 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 SLC25A26Q70HW3 274 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 TMPRSS11BQ86T26 416 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 ZNF547Q8IVP9 402 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 OR2G3Q8NGZ4 309 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 OR5B3Q8NH48 314 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 MBD3L2Q8NHZ7 208 aaPredicted RBP4.28□□□□□ -1.72
EPHA3-202ENST00000452448 PP6455Q8WZ26 134 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 TIMD4Q96H15 378 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 SGK494Q96LW2 274 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 C1QTNF5Q9BXJ0 243 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 OR2D2Q9H210 308 aa4.28□□□□□ -1.72
EPHA3-202ENST00000452448 TCEAL2Q9H3H9 227 aaPredicted RBP4.28□□□□□ -1.72
EPHA3-202ENST00000452448 APOBEC3GQ9HC16 384 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms