RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CPEB3Q8NE35 698 aaKnown RBP8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 PIGCQ92535 297 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 SGCZQ96LD1 299 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 KCNJ16Q9NPI9 418 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 P4HTMQ9NXG6 502 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 ST3GAL6Q9Y274 331 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 hCG_38984A0A1B0GV85 526 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 UMAD1C9J7I0 102 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 DEDDO75618 318 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 CCL2P13500 99 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 FCGR2CP31995 323 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 CAV2P51636 162 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 TMEM33P57088 247 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 SPINK14Q6IE38 97 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 SLC22A25Q6T423 547 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 CPT1CQ8TCG5 803 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 SMIM8Q96KF7 97 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 NEU1Q99519 415 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 RNF122Q9H9V4 155 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 TCFL5Q9UL49 500 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 K7EPK0 472 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 XRCC2O43543 280 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 TCN2P20062 427 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 HOXA5P20719 270 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 FOXG1P55316 489 aaPredicted RBP8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 KRTAP27-1Q3LI81 207 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 C10orf91Q5T1B1 145 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 TMEM268Q5VZI3 342 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 EIF5AL1Q6IS14 154 aaKnown RBP8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 SPNS3Q6ZMD2 512 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 FAM71E2Q8N5Q1 922 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 OR5L1Q8NGL2 311 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 HS3ST6Q96QI5 342 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 FAM212BQ9NTI7 297 aaPredicted RBP8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 FBXO7Q9Y3I1 522 aa8.99□□□□□ -0.97
CLSTN1-203ENST00000435891 SPENQ96T58 3664 aaKnown RBP8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 CCDC163A0A0D9SF12 145 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 MED19A0JLT2 244 aaPredicted RBP8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 MBPP02686 304 aaPredicted RBP8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 PET100P0DJ07 73 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 NUTF2P61970 127 aaKnown RBP8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 TMEM187Q14656 261 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 ARL6IP1Q15041 203 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 RHEBQ15382 184 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 OR2T2Q6IF00 324 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 Q6ZRG5 221 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 LRP11Q86VZ4 500 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 OR2V1Q8NHB1 315 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 RTN4IP1Q8WWV3 396 aaPredicted RBP8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 CDX2Q99626 313 aaPredicted RBP8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 PRRX2Q99811 253 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 GPR35Q9HC97 309 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 HSF4Q9ULV5 492 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 CFAP47Q6ZTR5 3102 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 GJE1A6NN92 205 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 CELA3AP09093 270 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 ZNF728P0DKX0 622 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 TNFRSF9Q07011 255 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 PPA1Q15181 289 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 CNN3Q15417 329 aaKnown RBP8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 ABLIM2Q6H8Q1 611 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 ASCL4Q6XD76 172 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 WDR5BQ86VZ2 330 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 OSR2Q8N2R0 312 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 GPHA2Q96T91 129 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 C2orf88Q9BSF0 95 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 NECAP2Q9NVZ3 263 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 TUBD1Q9UJT1 453 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 C3orf80F5H4A9 247 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 NME2P1O60361 137 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 GDF1P27539 372 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 TRA2AQ13595 282 aaKnown RBP eCLIP8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 PLCXD3Q63HM9 321 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 OR52M1Q8NGK5 317 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 PSMF1Q92530 271 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 HES7Q9BYE0 225 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 SLC2A9Q9NRM0 540 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 MEMO1Q9Y316 297 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 TIMM10BQ9Y5J6 103 aa8.98□□□□□ -0.97
CLSTN1-203ENST00000435891 A0A096LPE4 126 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 A0A1W2PPZ6 126 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 PPIHO43447 177 aaKnown RBP8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 MMP7P09237 267 aaPredicted RBP8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 HOXA6P31267 233 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 BPIFB3P59826 476 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 SRYQ05066 204 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 RTL6Q6ICC9 239 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 LHFPL2Q6ZUX7 228 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 FGF23Q9GZV9 251 aaPredicted RBP8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 NAA60Q9H7X0 242 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 NUDT19A8MXV4 375 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 SEC14L6B5MCN3 397 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 OR8U9P0C7N5 309 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 RAB4AP20338 218 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 FOXO1Q12778 655 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 KHDC3LQ587J8 217 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 ZNF610Q8N9Z0 462 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 OR8U1Q8NH10 309 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 WFDC1Q9HC57 220 aa8.97□□□□□ -0.97
CLSTN1-203ENST00000435891 IL36RNQ9UBH0 155 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms