RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ALKBH1Q13686 389 aaKnown RBP11.75□□□□□ -0.53
RPS28-201ENST00000417088 C11orf87Q6NUJ2 197 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 ETV3LQ6ZN32 361 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 THNSL2Q86YJ6 484 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 ACBD7Q8N6N7 88 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 RPEQ96AT9 228 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 C4orf36Q96KX1 117 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 H0YJX3 145 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 J3QR06 171 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 HSPB6O14558 160 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 IGHV3-7P01780 117 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 SNRNP70P08621 437 aaKnown RBP11.74□□□□□ -0.53
RPS28-201ENST00000417088 DBTP11182 482 aaKnown RBP11.74□□□□□ -0.53
RPS28-201ENST00000417088 SNRPGP62308 76 aaKnown RBP11.74□□□□□ -0.53
RPS28-201ENST00000417088 KISS1Q15726 138 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 ZNF329Q86UD4 541 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 MRPL41Q8IXM3 137 aaKnown RBP11.74□□□□□ -0.53
RPS28-201ENST00000417088 OR51T1Q8NGJ9 327 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 OR13A1Q8NGR1 328 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 LEAP2Q969E1 77 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 TOMM40LQ969M1 308 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 LINC00574Q9H8X3 128 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 PCDHB16Q9NRJ7 776 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 CALYQ9NYX4 217 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 KIF25Q9UIL4 384 aa11.74□□□□□ -0.53
RPS28-201ENST00000417088 EXOGQ9Y2C4 368 aaKnown RBP11.74□□□□□ -0.53
RPS28-201ENST00000417088 TRAV24A0A0B4J272 114 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 A0A1W2PPI3 338 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 E9PQ18 207 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 SULT1B1O43704 296 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 HCKP08631 526 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 GLP1RP43220 463 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 MTNR1BP49286 362 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 RASSF2P50749 326 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 DIAPH2-AS1Q14236 149 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 RYR3Q15413 4870 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 ZNF691Q5VV52 312 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 MEDAGQ5VYS4 303 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 C18orf65Q6ZTR6 163 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 SERPINA12Q8IW75 414 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 PARP16Q8N5Y8 322 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 DRAM1Q8N682 238 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 ZNF565Q8N9K5 539 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 OR5D14Q8NGL3 314 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 OR56B4Q8NH76 319 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 LGALS12Q96DT0 336 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 NOL4LQ96MY1 436 aaPredicted RBP11.73□□□□□ -0.53
RPS28-201ENST00000417088 NR1H4Q96RI1 486 aaPredicted RBP11.73□□□□□ -0.53
RPS28-201ENST00000417088 ZNF649Q9BS31 505 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 NCOR1P1Q9H4R4 102 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 AASSQ9UDR5 926 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 PSG11Q9UQ72 335 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 AMMECR1Q9Y4X0 333 aaPredicted RBP11.73□□□□□ -0.53
RPS28-201ENST00000417088 TENM3Q9P273 2699 aa11.73□□□□□ -0.53
RPS28-201ENST00000417088 MEIKINA0A087WXM9 373 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 ZFPL1O95159 310 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 IL1AP01583 271 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 ALPLP05186 524 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 C21orf33P30042 268 aaPredicted RBP11.72□□□□□ -0.53
RPS28-201ENST00000417088 THBS3P49746 956 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 RPL23AP62750 156 aaKnown RBP11.72□□□□□ -0.53
RPS28-201ENST00000417088 GALEQ14376 348 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 PAN3Q58A45 887 aaKnown RBP11.72□□□□□ -0.53
RPS28-201ENST00000417088 ELP2Q6IA86 826 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 OR2W3Q7Z3T1 314 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 LHFPL3Q86UP9 236 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 C5orf56Q8N8D9 126 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 PXT1Q8NFP0 134 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 OR51D1Q8NGF3 324 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 RFESDQ8TAC1 157 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 CNIH3Q8TBE1 160 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 CHPT1Q8WUD6 406 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 ALG8Q9BVK2 526 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 GPR61Q9BZJ8 451 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 ISG20L2Q9H9L3 353 aaKnown RBP11.72□□□□□ -0.53
RPS28-201ENST00000417088 IDI2-AS1Q9NZ38 188 aa11.72□□□□□ -0.53
RPS28-201ENST00000417088 NPIPB11E5RHQ5 1161 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 E9PI62 339 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 EI24O14681 340 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 FGF16O43320 207 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 TMEM11P17152 192 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 MADCAM1Q13477 382 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 HES1Q14469 280 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 HNF4GQ14541 408 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 ZSCAN26Q16670 478 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 LTC4SQ16873 150 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 ZIK1Q3SY52 487 aaPredicted RBP11.71□□□□□ -0.53
RPS28-201ENST00000417088 RSBN1Q5VWQ0 802 aaPredicted RBP11.71□□□□□ -0.53
RPS28-201ENST00000417088 LPCAT4Q643R3 524 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 SYS1Q8N2H4 156 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 PLPPR1Q8TBJ4 325 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 MRGPRDQ8TDS7 321 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 DPF1Q92782 380 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 BARHL1Q9BZE3 327 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.71□□□□□ -0.53
RPS28-201ENST00000417088 FAM53CQ9NYF3 392 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 LINC00527Q9UJ94 153 aa11.71□□□□□ -0.53
RPS28-201ENST00000417088 TMEM212A6NML5 194 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 SNTNA6NMZ2 147 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 SERPINE3A8MV23 424 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms