RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 LILRA3Q8N6C8 439 aaPredicted RBP12.3□□□□□ -0.44
RERE-204ENST00000400908 DYNLRB2Q8TF09 96 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 FAM117AQ9C073 453 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 HS3ST3A1Q9Y663 406 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 PPIHO43447 177 aaKnown RBP12.3□□□□□ -0.44
RERE-204ENST00000400908 PPP1R17O96001 155 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 GAB4Q2WGN9 574 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 Q5PR19 223 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 SEZ6L2Q6UXD5 910 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 MRGPRGQ86SM5 289 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 HSPB9Q9BQS6 159 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 MTFP1Q9UDX5 166 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 ZNF98A6NK75 572 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 FAM157AC9JC47 383 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 IL4P05112 153 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 CDX1P47902 265 aaPredicted RBP12.3□□□□□ -0.44
RERE-204ENST00000400908 PDCD1Q15116 288 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 RABAC1Q9UI14 185 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 KIAA1217Q5T5P2 1943 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 IGHV3-43A0A0B4J1X8 118 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 PAGE4O60829 102 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 IGHV3-43DP0DP04 118 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 OTPQ5XKR4 325 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 RHBDD2Q6NTF9 364 aa12.3□□□□□ -0.44
RERE-204ENST00000400908 ARFGEF1Q9Y6D6 1849 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 NRXN2Q9P2S2 1712 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 A0A1W2PR48 441 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 POLR2GP62487 172 aaKnown RBP eCLIP12.29□□□□□ -0.44
RERE-204ENST00000400908 ZNF506Q5JVG8 444 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 SLC25A34Q6PIV7 304 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 OIT3Q8WWZ8 545 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 THAP10Q9P2Z0 257 aaPredicted RBP12.29□□□□□ -0.44
RERE-204ENST00000400908 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.29□□□□□ -0.44
RERE-204ENST00000400908 FGF17O60258 216 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 KBTBD11O94819 623 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 CXorf1O96002 111 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 CDAP32320 146 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 COL19A1Q14993 1142 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 CLPPQ16740 277 aaPredicted RBP12.29□□□□□ -0.44
RERE-204ENST00000400908 TMEM52BQ4KMG9 183 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 NSUN5P2Q63ZY6 315 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 IGKV3-7A0A075B6H7 116 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 TRAV8-7A0A075B6U6 113 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 KISS1Q15726 138 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 VWA2Q5GFL6 755 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 FAM27D1Q5T7N8 215 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 WDR25Q64LD2 544 aaPredicted RBP12.29□□□□□ -0.44
RERE-204ENST00000400908 ZNF385CQ66K41 422 aaPredicted RBP12.29□□□□□ -0.44
RERE-204ENST00000400908 TMEM179BQ7Z7N9 219 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 LDLRAD3Q86YD5 345 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 FAM219AQ8IW50 185 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 OR4C3Q8NH37 302 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 OR4X1Q8NH49 305 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 OTOSQ8NHW6 89 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 NUBPLQ8TB37 319 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 R3HDM4Q96D70 268 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 RAB33BQ9H082 229 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 BEX4Q9NWD9 120 aaPredicted RBP12.29□□□□□ -0.44
RERE-204ENST00000400908 PGPEP1Q9NXJ5 209 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 SIT1Q9Y3P8 196 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 ANKRD12Q6UB98 2062 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 K7EQS6 105 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 PLPPR5Q32ZL2 321 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 FAM209BQ5JX69 171 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 SYT8Q8NBV8 401 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 ALG14Q96F25 216 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 TIMP4Q99727 224 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 PSMG3Q9BT73 122 aaPredicted RBP12.29□□□□□ -0.44
RERE-204ENST00000400908 MCM3APO60318 1980 aa12.29□□□□□ -0.44
RERE-204ENST00000400908 ROM1Q03395 351 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 FOXO1Q12778 655 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.28□□□□□ -0.44
RERE-204ENST00000400908 OR13G1Q8NGZ3 307 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 BCL2L10Q9HD36 194 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 MT-CO3P00414 261 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 NAT2P11245 290 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 LRRC75BQ2VPJ9 315 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 RNFT1Q5M7Z0 435 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 GUCD1Q96NT3 240 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 SUMO3P55854 103 aaPredicted RBP12.28□□□□□ -0.44
RERE-204ENST00000400908 CCSMST1Q4G0I0 132 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 FAM53AQ6NSI3 398 aaPredicted RBP12.28□□□□□ -0.44
RERE-204ENST00000400908 OR13C6PQ8NH95 151 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 SSMEM1Q8WWF3 244 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 ALKBH3Q96Q83 286 aaPredicted RBP12.28□□□□□ -0.44
RERE-204ENST00000400908 HOXA6P31267 233 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 EMDP50402 254 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 LIMS2Q7Z4I7 341 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 ASB16Q96NS5 453 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 CLEC1BQ9P126 229 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 H3BMH7 237 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 MEF2CQ06413 473 aaPredicted RBP12.28□□□□□ -0.44
RERE-204ENST00000400908 OR13H1Q8NG92 308 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 OR4C13Q8NGP0 309 aa12.28□□□□□ -0.44
RERE-204ENST00000400908 MPDU1O75352 247 aa12.27□□□□□ -0.44
RERE-204ENST00000400908 HSF5Q4G112 596 aaPredicted RBP12.27□□□□□ -0.44
RERE-204ENST00000400908 C16orf82Q7Z2V1 217 aa12.27□□□□□ -0.44
RERE-204ENST00000400908 SPNS2Q8IVW8 549 aa12.27□□□□□ -0.44
RERE-204ENST00000400908 ASCL3Q9NQ33 180 aa12.27□□□□□ -0.44
RERE-204ENST00000400908 PDCD6O75340 191 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms