RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ZDBF2Q9HCK1 2354 aa10.14□□□□□ -0.79
UBE2D3-209ENST00000394804 SIRPB1O00241 398 aa10.14□□□□□ -0.79
UBE2D3-209ENST00000394804 IFNA10P01566 189 aa10.14□□□□□ -0.79
UBE2D3-209ENST00000394804 GNG3P63215 75 aa10.14□□□□□ -0.79
UBE2D3-209ENST00000394804 SUPT4H1P63272 117 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-209ENST00000394804 TMEM54Q969K7 222 aa10.14□□□□□ -0.79
UBE2D3-209ENST00000394804 HIST1H2BAQ96A08 127 aa10.14□□□□□ -0.79
UBE2D3-209ENST00000394804 MESP1Q9BRJ9 268 aa10.14□□□□□ -0.79
UBE2D3-209ENST00000394804 GPR35Q9HC97 309 aa10.14□□□□□ -0.79
UBE2D3-209ENST00000394804 ERRFI1Q9UJM3 462 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-209ENST00000394804 GAB2Q9UQC2 676 aa10.14□□□□□ -0.79
UBE2D3-209ENST00000394804 A0A1W2PPV4 95 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 CHST1O43916 411 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 EFNA2O43921 213 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 PITX3O75364 302 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 TAS2R30P59541 319 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 PSG4Q00888 419 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 FSCN3Q9NQT6 498 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 H7BYZ3 331 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 RPL36A-HNRNPH2H7BZ11 118 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 WISP1O95388 367 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 CCL4P13236 92 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 ZNF92Q03936 586 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 TMEM267Q0VDI3 215 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 TBC1D28Q2M2D7 210 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 FBXO17Q96EF6 278 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 GALNT14Q96FL9 552 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 IGLV3-32A0A0A0MS00 114 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 A0A1W2PQM1 296 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 ERVK-16P61578 105 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 MPV17LQ2QL34 196 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 RTN4RL2Q86UN3 420 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 TMEM252Q8N6L7 170 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 OR52M1Q8NGK5 317 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 CCL28Q9NRJ3 127 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 KIAA1456Q9P272 454 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 TUBD1Q9UJT1 453 aa10.13□□□□□ -0.79
UBE2D3-209ENST00000394804 H3BQ15 152 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 RD3LP0DJH9 198 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 NOVA1P51513 510 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 SUCLG1P53597 346 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 MLF1P58340 268 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 NCMAPQ5T1S8 102 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 NSUN5P2Q63ZY6 315 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 OR2T2Q6IF00 324 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 KCNIP4Q6PIL6 250 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 BTNL8Q6UX41 500 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 ATP5SQ99766 215 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 SMIM7Q9BQ49 75 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 CHCHD2Q9Y6H1 151 aaPredicted RBP10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 DUXBA0A1W2PPF3 345 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 C17orf112F2Z3M2 114 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 CD46P15529 392 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 BCL3P20749 454 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 CTSSP25774 331 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 PCOLCEQ15113 449 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 RSPO4Q2I0M5 234 aaPredicted RBP10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 IGSF11Q5DX21 431 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 RNF144BQ7Z419 303 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 FAM58AQ8N1B3 248 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 ABHD3Q8WU67 409 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 TMEM222Q9H0R3 208 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 BARX1Q9HBU1 254 aaPredicted RBP10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 IGHV1-45A0A0A0MS14 117 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 ADAM10O14672 748 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 CCL2P13500 99 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 PPP1CCP36873 323 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 FHITP49789 147 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 UCP3P55916 312 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 ZNF154Q13106 437 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 PPP1R35Q8TAP8 253 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 PINX1Q96BK5 328 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 CACNG5Q9UF02 275 aa10.12□□□□□ -0.79
UBE2D3-209ENST00000394804 CLEC18AA5D8T8 446 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 PPP5D1E7EU14 171 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 CLDN34H7C241 214 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 EIF3GO75821 320 aaKnown RBP eCLIP10.11□□□□□ -0.796e-9■■■■□ 22.8
UBE2D3-209ENST00000394804 GRPP07492 148 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 KLK2P20151 261 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 CD200P41217 278 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 RPP30P78346 268 aaKnown RBP10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 HLA-DRB3P79483 266 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 FADS6Q8N9I5 356 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 CLEC18CQ8NCF0 446 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 FRZBQ92765 325 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 LYZL4Q96KX0 146 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 SH3BGRL3Q9H299 93 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 MIOXQ9UGB7 285 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 LOXL2Q9Y4K0 774 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 DENND4AQ7Z401 1863 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 ZNF705GA8MUZ8 300 aaPredicted RBP10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 SH2D1BO14796 132 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 HEXAP06865 529 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 ARG2P78540 354 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 H3F3AP84243 136 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 C4orf17Q53FE4 359 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 MOB1BQ7L9L4 216 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 SDSLQ96GA7 329 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 FAM173AQ9BQD7 235 aa10.11□□□□□ -0.79
UBE2D3-209ENST00000394804 BPTFQ12830 3046 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms