RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 EFEMP2O95967 443 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 RTL8BQ17RB0 113 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 S100A7AQ86SG5 101 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 OR10G4Q8NGN3 311 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 OR10G9Q8NGN4 311 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 OR10G7Q8NGN6 311 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 TAAR9Q96RI9 348 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 SLC7A10Q9NS82 523 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 TSC2P49815 1807 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 LRRC30A6NM36 301 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 RPL36A-HNRNPH2H7BZ11 118 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 CXorf67Q86X51 503 aaPredicted RBP15.22■□□□□ 0.03
PTPRU-202ENST00000373779 PLA2G3Q9NZ20 509 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 SH3BGRL2Q9UJC5 107 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 UBE2G1P62253 170 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 MPV17LQ2QL34 196 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 OR2D2Q9H210 308 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 RCC2Q9P258 522 aaKnown RBP15.22■□□□□ 0.03
PTPRU-202ENST00000373779 SPTBP11277 2137 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 SUB1P53999 127 aaKnown RBP eCLIP15.22■□□□□ 0.03
PTPRU-202ENST00000373779 IQCJQ1A5X6 159 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 C17orf78Q8N4C9 275 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 OR2Y1Q8NGV0 311 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 TMEM147Q9BVK8 224 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 WNT16Q9UBV4 365 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 TMEM14DPA8MWL7 114 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 ATP6V1FQ16864 119 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 LRRC75AQ8NAA5 344 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 OR2I1PQ8NGU4 316 aa15.22■□□□□ 0.03
PTPRU-202ENST00000373779 KDF1Q8NAX2 398 aaPredicted RBP15.21■□□□□ 0.03
PTPRU-202ENST00000373779 SMDT1Q9H4I9 107 aa15.21■□□□□ 0.03
PTPRU-202ENST00000373779 TPPP2P59282 170 aa15.21■□□□□ 0.03
PTPRU-202ENST00000373779 IGFBP7Q16270 282 aa15.21■□□□□ 0.03
PTPRU-202ENST00000373779 GPR35Q9HC97 309 aa15.21■□□□□ 0.03
PTPRU-202ENST00000373779 DECR2Q9NUI1 292 aa15.21■□□□□ 0.03
PTPRU-202ENST00000373779 RBM11P57052 281 aaKnown RBP15.21■□□□□ 0.03
PTPRU-202ENST00000373779 RPS23P62266 143 aaKnown RBP15.21■□□□□ 0.03
PTPRU-202ENST00000373779 PROCRQ9UNN8 238 aa15.21■□□□□ 0.03
PTPRU-202ENST00000373779 C17orf51A8MQB3 221 aa15.21■□□□□ 0.02
PTPRU-202ENST00000373779 ADAM11O75078 769 aa15.21■□□□□ 0.02
PTPRU-202ENST00000373779 CYC1P08574 325 aa15.21■□□□□ 0.02
PTPRU-202ENST00000373779 GABRA4P48169 554 aa15.21■□□□□ 0.02
PTPRU-202ENST00000373779 BSXQ3C1V8 233 aa15.21■□□□□ 0.02
PTPRU-202ENST00000373779 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.21■□□□□ 0.02
PTPRU-202ENST00000373779 USB1Q9BQ65 265 aaKnown RBP15.21■□□□□ 0.02
PTPRU-202ENST00000373779 PLXNA3P51805 1871 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 SCN2AQ99250 2005 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 IGHV5-10-1A0A0J9YXX1 117 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 CRYM-AS1A6NIL9 109 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 IGSF11Q5DX21 431 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 FAM27BQ5VT28 67 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 FBXO17Q96EF6 278 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 IL3RAP26951 378 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 CDC34P49427 236 aaPredicted RBP15.2■□□□□ 0.02
PTPRU-202ENST00000373779 UBALD2Q8IYN6 164 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 SCCPDHQ8NBX0 429 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 VAX2Q9UIW0 290 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 ZNF646O15015 1829 aaPredicted RBP15.2■□□□□ 0.02
PTPRU-202ENST00000373779 DUXBA0A1W2PPF3 345 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 TGFBR3LH3BV60 316 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 M0R1X1 148 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 OR10J4P0C629 311 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 NTF3P20783 257 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 SSPNQ14714 243 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 ERVS71-1P61550 626 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 SARAFQ96BY9 339 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 Q9N2K0 584 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 TMEM9BQ9NQ34 198 aa15.2■□□□□ 0.02
PTPRU-202ENST00000373779 IGKV3-11P04433 115 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 HEXAP06865 529 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 DEFB108BQ8NET1 73 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 CMTM2Q8TAZ6 248 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 NEIL1Q96FI4 390 aaPredicted RBP15.19■□□□□ 0.02
PTPRU-202ENST00000373779 KCNMB2Q9Y691 235 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 MTCL1Q9Y4B5 1905 aaKnown RBP15.19■□□□□ 0.02
PTPRU-202ENST00000373779 DNPH1O43598 174 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 SMRP1Q8NCR6 262 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 TRGV5A0A0B4J1U4 118 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 LOC101059948A0A1B0GTJ6 334 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 KIAA1456Q9P272 454 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 A0A1B0GU03 582 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 LY86O95711 162 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 PRF1P14222 555 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 CHRNA7P36544 502 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 TLE1Q04724 770 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 Q3ZCU0 254 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 PSG11Q9UQ72 335 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 OR2W1Q9Y3N9 320 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 OR3A1P47881 315 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 ERVFC1-1P60608 527 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 NSUN5P2Q63ZY6 315 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 MANBALQ9NQG1 85 aa15.19■□□□□ 0.02
PTPRU-202ENST00000373779 C1QL1O75973 258 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 CRYAAP02489 173 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 HLA-GP17693 338 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 SPINK2P20155 84 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 ZXDAP98168 799 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 PMS2P11Q13670 270 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 C9orf152Q5JTZ5 239 aa15.18■□□□□ 0.02
PTPRU-202ENST00000373779 DPPA3Q6W0C5 159 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms